Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:52340804-53040957

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcal2 17 26182038 to 52604676 26422638 QTL kilocalorie 2
Obrq14 17 48706312 to 52659396 3953084 QTL obesity resistance QTL 14
Gm49912 17 52312191 to 52350056 37865 - lincRNA gene predicted gene, 49912
Tssr148701 17 52348642 to 52348658 16 - TSS region transcription start site region 148701
Tssr145196 17 52348716 to 52348731 15 + TSS region transcription start site region 145196
Tssr148702 17 52350013 to 52350022 9 - TSS region transcription start site region 148702
Tssr5164 17 52350042 to 52350047 5 - TSS region transcription start site region 5164
Tssr148703 17 52350050 to 52350061 11 - TSS region transcription start site region 148703
Tssr145197 17 52351510 to 52351543 33 + TSS region transcription start site region 145197
Gm5094 17 52452575 to 52461765 9190 - lincRNA gene predicted gene 5094
Tssr145198 17 52457174 to 52457177 3 + TSS region transcription start site region 145198
Tssr145199 17 52458680 to 52458691 11 + TSS region transcription start site region 145199
Tssr145200 17 52468773 to 52468793 20 + TSS region transcription start site region 145200
Tssr145201 17 52468796 to 52468809 13 + TSS region transcription start site region 145201
Gm27217 17 52593393 to 52602660 9267 - antisense lncRNA gene predicted gene 27217
Cpgi9313 17 52601039 to 52601476 437 CpG island CpG island 9313
Cpgi9314 17 52602183 to 52602969 786 CpG island CpG island 9314
Tssr145202 17 52602242 to 52602284 42 + TSS region transcription start site region 145202
Tssr145203 17 52602285 to 52602295 10 + TSS region transcription start site region 145203
Tssr145204 17 52602397 to 52602437 40 + TSS region transcription start site region 145204
Tssr145205 17 52602700 to 52602717 17 + TSS region transcription start site region 145205
Kcnh8 17 52602709 to 52979194 376485 + protein coding gene potassium voltage-gated channel, subfamily H (eag-related), member 8
Tssr5165 17 52602722 to 52602760 38 + TSS region transcription start site region 5165
D17Mit6 17 52604576 to 52604676 100 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 6
Tssr145206 17 52625036 to 52625040 4 + TSS region transcription start site region 145206
Amzn2 17 52659266 to 52659396 130 QTL anatomical modifier of Zfp423 2
D17Mit139 17 52659266 to 52659396 130 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 139
D17Dcr14 17 52659298 to 52659399 101 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 14
D17Mit70 17 52690804 to 52690957 153 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 70
Tssr5166 17 52719864 to 52719868 4 + TSS region transcription start site region 5166
Tssr145207 17 52757091 to 52757093 2 + TSS region transcription start site region 145207
D17Mit86 17 53021695 to 53021844 149 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 86
Tssr5167 17 53022780 to 53022781 1 - TSS region transcription start site region 5167