Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:52307174-52607177

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcal2 17 26182038 to 52604676 26422638 QTL kilocalorie 2
Gm41600 17 52304434 to 52326312 21878 + lincRNA gene predicted gene, 41600
Tssr145193 17 52307574 to 52307622 48 + TSS region transcription start site region 145193
Tssr145194 17 52307706 to 52307717 11 + TSS region transcription start site region 145194
Tssr145195 17 52309899 to 52309904 5 + TSS region transcription start site region 145195
Tssr148699 17 52312165 to 52312181 16 - TSS region transcription start site region 148699
Gm49912 17 52312191 to 52350056 37865 - lincRNA gene predicted gene, 49912
Tssr148700 17 52312204 to 52312220 16 - TSS region transcription start site region 148700
Tssr148701 17 52348642 to 52348658 16 - TSS region transcription start site region 148701
Tssr145196 17 52348716 to 52348731 15 + TSS region transcription start site region 145196
Tssr148702 17 52350013 to 52350022 9 - TSS region transcription start site region 148702
Tssr5164 17 52350042 to 52350047 5 - TSS region transcription start site region 5164
Tssr148703 17 52350050 to 52350061 11 - TSS region transcription start site region 148703
Tssr145197 17 52351510 to 52351543 33 + TSS region transcription start site region 145197
Gm5094 17 52452575 to 52461765 9190 - lincRNA gene predicted gene 5094
Tssr145198 17 52457174 to 52457177 3 + TSS region transcription start site region 145198
Tssr145199 17 52458680 to 52458691 11 + TSS region transcription start site region 145199
Tssr145200 17 52468773 to 52468793 20 + TSS region transcription start site region 145200
Tssr145201 17 52468796 to 52468809 13 + TSS region transcription start site region 145201
Gm27217 17 52593393 to 52602660 9267 - antisense lncRNA gene predicted gene 27217
Cpgi9313 17 52601039 to 52601476 437 CpG island CpG island 9313
Cpgi9314 17 52602183 to 52602969 786 CpG island CpG island 9314
Tssr145202 17 52602242 to 52602284 42 + TSS region transcription start site region 145202
Tssr145203 17 52602285 to 52602295 10 + TSS region transcription start site region 145203
Tssr145204 17 52602397 to 52602437 40 + TSS region transcription start site region 145204
Tssr145205 17 52602700 to 52602717 17 + TSS region transcription start site region 145205
Kcnh8 17 52602709 to 52979194 376485 + protein coding gene potassium voltage-gated channel, subfamily H (eag-related), member 8
Tssr5165 17 52602722 to 52602760 38 + TSS region transcription start site region 5165
D17Mit6 17 52604576 to 52604676 100 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 6