Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:51830720-52060729

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Satb1 17 51736187 to 51833290 97103 - protein coding gene special AT-rich sequence binding protein 1
Cpgi9312 17 51831455 to 51833631 2176 CpG island CpG island 9312
Tssr148679 17 51831884 to 51831895 11 - TSS region transcription start site region 148679
Tssr148680 17 51832607 to 51832633 26 - TSS region transcription start site region 148680
Tssr148681 17 51832635 to 51832654 19 - TSS region transcription start site region 148681
Tssr148682 17 51832666 to 51832678 12 - TSS region transcription start site region 148682
Tssr148683 17 51832692 to 51832697 5 - TSS region transcription start site region 148683
Tssr145166 17 51832757 to 51832777 20 + TSS region transcription start site region 145166
Tssr145167 17 51832778 to 51832800 22 + TSS region transcription start site region 145167
Tssr145168 17 51832815 to 51832825 10 + TSS region transcription start site region 145168
Gm6934 17 51832819 to 51834723 1904 + protein coding gene predicted gene 6934
Tssr145169 17 51833007 to 51833017 10 + TSS region transcription start site region 145169
Tssr145170 17 51833020 to 51833037 17 + TSS region transcription start site region 145170
Tssr148684 17 51833075 to 51833103 28 - TSS region transcription start site region 148684
Tssr148685 17 51833113 to 51833138 25 - TSS region transcription start site region 148685
Tssr148686 17 51833205 to 51833246 41 - TSS region transcription start site region 148686
Tssr145171 17 51833242 to 51833261 19 + TSS region transcription start site region 145171
Tssr148687 17 51833250 to 51833270 20 - TSS region transcription start site region 148687
Tssr148688 17 51833278 to 51833299 21 - TSS region transcription start site region 148688
Tssr145172 17 51834462 to 51834471 9 + TSS region transcription start site region 145172
Gm16489 17 51841229 to 51852524 11295 protein coding gene predicted gene 16489
Gm37593 17 51842861 to 51846114 3253 + unclassified gene predicted gene, 37593
Gm37266 17 51850239 to 51852525 2286 + unclassified gene predicted gene, 37266
Tssr145173 17 51853154 to 51853161 7 + TSS region transcription start site region 145173
Gm37176 17 51859167 to 51863217 4050 + unclassified gene predicted gene, 37176
Tssr145174 17 51859596 to 51859597 1 + TSS region transcription start site region 145174
Tssr145175 17 51879882 to 51879906 24 + TSS region transcription start site region 145175
Tssr145176 17 51882691 to 51882706 15 + TSS region transcription start site region 145176
Gm20098 17 51882727 to 51965257 82530 + lincRNA gene predicted gene, 20098
Tssr148689 17 51899583 to 51899627 44 - TSS region transcription start site region 148689
Tssr148690 17 51903920 to 51903930 10 - TSS region transcription start site region 148690
Tssr148691 17 51903950 to 51903961 11 - TSS region transcription start site region 148691
Tssr145177 17 51904205 to 51904222 17 + TSS region transcription start site region 145177
Tssr148692 17 51945720 to 51945729 9 - TSS region transcription start site region 148692
Tssr148693 17 51956547 to 51956566 19 - TSS region transcription start site region 148693
Gm19197 17 52008967 to 52009569 602 + pseudogene predicted gene, 19197