Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:51809583-51989627

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Satb1 17 51736187 to 51833290 97103 - protein coding gene special AT-rich sequence binding protein 1
Tssr148646 17 51810866 to 51810873 7 - TSS region transcription start site region 148646
Tssr148647 17 51812045 to 51812057 12 - TSS region transcription start site region 148647
Tssr148648 17 51812058 to 51812084 26 - TSS region transcription start site region 148648
Tssr148649 17 51812309 to 51812326 17 - TSS region transcription start site region 148649
Tssr148650 17 51812337 to 51812345 8 - TSS region transcription start site region 148650
Cpgi9311 17 51812346 to 51813827 1481 CpG island CpG island 9311
Tssr148651 17 51813212 to 51813227 15 - TSS region transcription start site region 148651
Tssr148652 17 51813292 to 51813355 63 - TSS region transcription start site region 148652
Tssr5163 17 51813486 to 51813519 33 - TSS region transcription start site region 5163
Tssr148653 17 51813531 to 51813551 20 - TSS region transcription start site region 148653
Tssr148654 17 51813568 to 51813579 11 - TSS region transcription start site region 148654
Tssr148655 17 51813825 to 51813832 7 - TSS region transcription start site region 148655
Tssr148656 17 51813872 to 51813883 11 - TSS region transcription start site region 148656
Tssr148657 17 51813905 to 51813916 11 - TSS region transcription start site region 148657
Tssr148658 17 51814229 to 51814236 7 - TSS region transcription start site region 148658
Tssr148659 17 51814291 to 51814303 12 - TSS region transcription start site region 148659
Tssr148660 17 51814462 to 51814487 25 - TSS region transcription start site region 148660
Tssr148661 17 51814609 to 51814624 15 - TSS region transcription start site region 148661
Tssr148662 17 51815313 to 51815330 17 - TSS region transcription start site region 148662
Tssr148663 17 51815802 to 51815811 9 - TSS region transcription start site region 148663
Tssr148664 17 51815825 to 51815834 9 - TSS region transcription start site region 148664
Tssr148665 17 51815989 to 51816016 27 - TSS region transcription start site region 148665
Tssr148666 17 51816912 to 51816923 11 - TSS region transcription start site region 148666
Tssr148667 17 51822403 to 51822406 3 - TSS region transcription start site region 148667
Tssr148668 17 51823385 to 51823389 4 - TSS region transcription start site region 148668
Tssr148669 17 51823528 to 51823530 2 - TSS region transcription start site region 148669
Tssr148670 17 51824791 to 51824802 11 - TSS region transcription start site region 148670
Tssr148671 17 51825222 to 51825233 11 - TSS region transcription start site region 148671
Tssr148672 17 51826290 to 51826293 3 - TSS region transcription start site region 148672
Tssr148673 17 51826535 to 51826551 16 - TSS region transcription start site region 148673
Tssr148674 17 51826578 to 51826601 23 - TSS region transcription start site region 148674
Tssr148675 17 51826603 to 51826635 32 - TSS region transcription start site region 148675
Tssr148676 17 51826689 to 51826700 11 - TSS region transcription start site region 148676
Tssr145164 17 51826722 to 51826741 19 + TSS region transcription start site region 145164
Tssr148677 17 51829523 to 51829537 14 - TSS region transcription start site region 148677
Tssr148678 17 51829616 to 51829626 10 - TSS region transcription start site region 148678
Tssr145165 17 51829665 to 51829684 19 + TSS region transcription start site region 145165
Cpgi9312 17 51831455 to 51833631 2176 CpG island CpG island 9312
Tssr148679 17 51831884 to 51831895 11 - TSS region transcription start site region 148679
Tssr148680 17 51832607 to 51832633 26 - TSS region transcription start site region 148680
Tssr148681 17 51832635 to 51832654 19 - TSS region transcription start site region 148681
Tssr148682 17 51832666 to 51832678 12 - TSS region transcription start site region 148682
Tssr148683 17 51832692 to 51832697 5 - TSS region transcription start site region 148683
Tssr145166 17 51832757 to 51832777 20 + TSS region transcription start site region 145166
Tssr145167 17 51832778 to 51832800 22 + TSS region transcription start site region 145167
Tssr145168 17 51832815 to 51832825 10 + TSS region transcription start site region 145168
Gm6934 17 51832819 to 51834723 1904 + protein coding gene predicted gene 6934
Tssr145169 17 51833007 to 51833017 10 + TSS region transcription start site region 145169
Tssr145170 17 51833020 to 51833037 17 + TSS region transcription start site region 145170
Tssr148684 17 51833075 to 51833103 28 - TSS region transcription start site region 148684
Tssr148685 17 51833113 to 51833138 25 - TSS region transcription start site region 148685
Tssr148686 17 51833205 to 51833246 41 - TSS region transcription start site region 148686
Tssr145171 17 51833242 to 51833261 19 + TSS region transcription start site region 145171
Tssr148687 17 51833250 to 51833270 20 - TSS region transcription start site region 148687
Tssr148688 17 51833278 to 51833299 21 - TSS region transcription start site region 148688
Tssr145172 17 51834462 to 51834471 9 + TSS region transcription start site region 145172
Gm16489 17 51841229 to 51852524 11295 protein coding gene predicted gene 16489
Gm37593 17 51842861 to 51846114 3253 + unclassified gene predicted gene, 37593
Gm37266 17 51850239 to 51852525 2286 + unclassified gene predicted gene, 37266
Tssr145173 17 51853154 to 51853161 7 + TSS region transcription start site region 145173
Gm37176 17 51859167 to 51863217 4050 + unclassified gene predicted gene, 37176
Tssr145174 17 51859596 to 51859597 1 + TSS region transcription start site region 145174
Tssr145175 17 51879882 to 51879906 24 + TSS region transcription start site region 145175
Tssr145176 17 51882691 to 51882706 15 + TSS region transcription start site region 145176
Gm20098 17 51882727 to 51965257 82530 + lincRNA gene predicted gene, 20098
Tssr148689 17 51899583 to 51899627 44 - TSS region transcription start site region 148689
Tssr148690 17 51903920 to 51903930 10 - TSS region transcription start site region 148690
Tssr148691 17 51903950 to 51903961 11 - TSS region transcription start site region 148691
Tssr145177 17 51904205 to 51904222 17 + TSS region transcription start site region 145177
Tssr148692 17 51945720 to 51945729 9 - TSS region transcription start site region 148692
Tssr148693 17 51956547 to 51956566 19 - TSS region transcription start site region 148693