Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:50844480-52294481

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161 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hbnr7 17 42740294 to 51432094 8691800 QTL Heligmosomoides bakeri nematode resistance 7
Tbc1d5 17 50733124 to 51179352 446228 - protein coding gene TBC1 domain family, member 5
Gm31083 17 50879728 to 50899481 19753 + lncRNA gene predicted gene, 31083
Tssr148601 17 50879814 to 50879853 39 - TSS region transcription start site region 148601
Tssr5159 17 50891429 to 50891431 2 + TSS region transcription start site region 5159
Gm25177 17 50916925 to 50917041 116 - snRNA gene predicted gene, 25177
Tssr148602 17 50993677 to 50993688 11 - TSS region transcription start site region 148602
Tssr148603 17 51084260 to 51084264 4 - TSS region transcription start site region 148603
D17Mit9 17 51168551 to 51168656 105 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 9
Tssr148604 17 51171631 to 51171647 16 - TSS region transcription start site region 148604
Tssr148605 17 51175514 to 51175517 3 - TSS region transcription start site region 148605
Cpgi9309 17 51178509 to 51179787 1278 CpG island CpG island 9309
Tssr145160 17 51178699 to 51178752 53 + TSS region transcription start site region 145160
Tssr148606 17 51179249 to 51179343 94 - TSS region transcription start site region 148606
D17Mit179 17 51195070 to 51195249 179 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 179
Gm49908 17 51236771 to 51237062 291 - pseudogene predicted gene, 49908
C330011F03Rik 17 51425209 to 51435838 10629 - lincRNA gene RIKEN cDNA C330011F03 gene
Lfnq5 17 51431951 to 57227623 5795672 QTL lung function QTL 5
D17Mit180 17 51431951 to 51432094 143 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 180
Tssr145161 17 51435536 to 51435543 7 + TSS region transcription start site region 145161
Tssr145162 17 51479691 to 51479693 2 + TSS region transcription start site region 145162
Gm46574 17 51484292 to 51484721 429 - pseudogene predicted gene, 46574
Gm31143 17 51534258 to 51534745 487 - lincRNA gene predicted gene, 31143
Tssr145163 17 51569480 to 51569481 1 + TSS region transcription start site region 145163
Cpgi9310 17 51583325 to 51583539 214 CpG island CpG island 9310
Tssr5160 17 51642051 to 51642054 3 + TSS region transcription start site region 5160
Satb1 17 51736187 to 51833290 97103 - protein coding gene special AT-rich sequence binding protein 1
Tssr148607 17 51737847 to 51737858 11 - TSS region transcription start site region 148607
Tssr148608 17 51739678 to 51739695 17 - TSS region transcription start site region 148608
Tssr148609 17 51739923 to 51739938 15 - TSS region transcription start site region 148609
Tssr148610 17 51744959 to 51744962 3 - TSS region transcription start site region 148610
E430014B02Rik 17 51745529 to 51748684 3155 - unclassified gene RIKEN cDNA E430014B02 gene
Tssr148611 17 51746965 to 51746970 5 - TSS region transcription start site region 148611
Tssr148612 17 51747695 to 51747723 28 - TSS region transcription start site region 148612
Tssr148613 17 51751168 to 51751176 8 - TSS region transcription start site region 148613
Tssr148614 17 51752600 to 51752605 5 - TSS region transcription start site region 148614
Tssr5161 17 51755163 to 51755200 37 - TSS region transcription start site region 5161
Tssr148615 17 51756452 to 51756467 15 - TSS region transcription start site region 148615
C230085N15Rik 17 51757295 to 51761621 4326 - unclassified gene RIKEN cDNA C230085N15 gene
Tssr148616 17 51759403 to 51759414 11 - TSS region transcription start site region 148616
Tssr148617 17 51759547 to 51759549 2 - TSS region transcription start site region 148617
Tssr148618 17 51759808 to 51759814 6 - TSS region transcription start site region 148618
Tssr148619 17 51761801 to 51761804 3 - TSS region transcription start site region 148619
Tssr5162 17 51766605 to 51766616 11 - TSS region transcription start site region 5162
Gm36931 17 51766643 to 51771443 4800 - unclassified gene predicted gene, 36931
Tssr148620 17 51766754 to 51766767 13 - TSS region transcription start site region 148620
Tssr148621 17 51767498 to 51767501 3 - TSS region transcription start site region 148621
Tssr148622 17 51775199 to 51775209 10 - TSS region transcription start site region 148622
Tssr148623 17 51775452 to 51775462 10 - TSS region transcription start site region 148623
Tssr148624 17 51776534 to 51776539 5 - TSS region transcription start site region 148624
Tssr148625 17 51779048 to 51779051 3 - TSS region transcription start site region 148625
Tssr148626 17 51782603 to 51782615 12 - TSS region transcription start site region 148626
Tssr148627 17 51782893 to 51782904 11 - TSS region transcription start site region 148627
Tssr148628 17 51782923 to 51782949 26 - TSS region transcription start site region 148628
Tssr148629 17 51787025 to 51787043 18 - TSS region transcription start site region 148629
Tssr148630 17 51790201 to 51790204 3 - TSS region transcription start site region 148630
5830444F18Rik 17 51791470 to 51793461 1991 - unclassified gene RIKEN cDNA 5830444F18 gene
Tssr148631 17 51792385 to 51792387 2 - TSS region transcription start site region 148631
Tssr148632 17 51793908 to 51793918 10 - TSS region transcription start site region 148632
Tssr148633 17 51794243 to 51794252 9 - TSS region transcription start site region 148633
Tssr148634 17 51795602 to 51795632 30 - TSS region transcription start site region 148634
Tssr148635 17 51795635 to 51795642 7 - TSS region transcription start site region 148635
Gm37248 17 51796017 to 51799190 3173 - unclassified gene predicted gene, 37248
Tssr148636 17 51796138 to 51796166 28 - TSS region transcription start site region 148636
Tssr148637 17 51796280 to 51796319 39 - TSS region transcription start site region 148637
Tssr148638 17 51796389 to 51796401 12 - TSS region transcription start site region 148638
Tssr148639 17 51796475 to 51796493 18 - TSS region transcription start site region 148639
Tssr148640 17 51797029 to 51797038 9 - TSS region transcription start site region 148640
Tssr148641 17 51797070 to 51797080 10 - TSS region transcription start site region 148641
Tssr148642 17 51797598 to 51797610 12 - TSS region transcription start site region 148642
Tssr148643 17 51798300 to 51798306 6 - TSS region transcription start site region 148643
Tssr148644 17 51804259 to 51804270 11 - TSS region transcription start site region 148644
Tssr148645 17 51805236 to 51805249 13 - TSS region transcription start site region 148645
Tssr148646 17 51810866 to 51810873 7 - TSS region transcription start site region 148646
Tssr148647 17 51812045 to 51812057 12 - TSS region transcription start site region 148647
Tssr148648 17 51812058 to 51812084 26 - TSS region transcription start site region 148648
Tssr148649 17 51812309 to 51812326 17 - TSS region transcription start site region 148649
Tssr148650 17 51812337 to 51812345 8 - TSS region transcription start site region 148650
Cpgi9311 17 51812346 to 51813827 1481 CpG island CpG island 9311
Tssr148651 17 51813212 to 51813227 15 - TSS region transcription start site region 148651
Tssr148652 17 51813292 to 51813355 63 - TSS region transcription start site region 148652
Tssr5163 17 51813486 to 51813519 33 - TSS region transcription start site region 5163
Tssr148653 17 51813531 to 51813551 20 - TSS region transcription start site region 148653
Tssr148654 17 51813568 to 51813579 11 - TSS region transcription start site region 148654
Tssr148655 17 51813825 to 51813832 7 - TSS region transcription start site region 148655
Tssr148656 17 51813872 to 51813883 11 - TSS region transcription start site region 148656
Tssr148657 17 51813905 to 51813916 11 - TSS region transcription start site region 148657
Tssr148658 17 51814229 to 51814236 7 - TSS region transcription start site region 148658
Tssr148659 17 51814291 to 51814303 12 - TSS region transcription start site region 148659
Tssr148660 17 51814462 to 51814487 25 - TSS region transcription start site region 148660
Tssr148661 17 51814609 to 51814624 15 - TSS region transcription start site region 148661
Tssr148662 17 51815313 to 51815330 17 - TSS region transcription start site region 148662
Tssr148663 17 51815802 to 51815811 9 - TSS region transcription start site region 148663
Tssr148664 17 51815825 to 51815834 9 - TSS region transcription start site region 148664
Tssr148665 17 51815989 to 51816016 27 - TSS region transcription start site region 148665
Tssr148666 17 51816912 to 51816923 11 - TSS region transcription start site region 148666
Tssr148667 17 51822403 to 51822406 3 - TSS region transcription start site region 148667
Tssr148668 17 51823385 to 51823389 4 - TSS region transcription start site region 148668
Tssr148669 17 51823528 to 51823530 2 - TSS region transcription start site region 148669
Tssr148670 17 51824791 to 51824802 11 - TSS region transcription start site region 148670
Tssr148671 17 51825222 to 51825233 11 - TSS region transcription start site region 148671
Tssr148672 17 51826290 to 51826293 3 - TSS region transcription start site region 148672
Tssr148673 17 51826535 to 51826551 16 - TSS region transcription start site region 148673
Tssr148674 17 51826578 to 51826601 23 - TSS region transcription start site region 148674
Tssr148675 17 51826603 to 51826635 32 - TSS region transcription start site region 148675
Tssr148676 17 51826689 to 51826700 11 - TSS region transcription start site region 148676
Tssr145164 17 51826722 to 51826741 19 + TSS region transcription start site region 145164
Tssr148677 17 51829523 to 51829537 14 - TSS region transcription start site region 148677
Tssr148678 17 51829616 to 51829626 10 - TSS region transcription start site region 148678
Tssr145165 17 51829665 to 51829684 19 + TSS region transcription start site region 145165
Cpgi9312 17 51831455 to 51833631 2176 CpG island CpG island 9312
Tssr148679 17 51831884 to 51831895 11 - TSS region transcription start site region 148679
Tssr148680 17 51832607 to 51832633 26 - TSS region transcription start site region 148680
Tssr148681 17 51832635 to 51832654 19 - TSS region transcription start site region 148681
Tssr148682 17 51832666 to 51832678 12 - TSS region transcription start site region 148682
Tssr148683 17 51832692 to 51832697 5 - TSS region transcription start site region 148683
Tssr145166 17 51832757 to 51832777 20 + TSS region transcription start site region 145166
Tssr145167 17 51832778 to 51832800 22 + TSS region transcription start site region 145167
Tssr145168 17 51832815 to 51832825 10 + TSS region transcription start site region 145168
Gm6934 17 51832819 to 51834723 1904 + protein coding gene predicted gene 6934
Tssr145169 17 51833007 to 51833017 10 + TSS region transcription start site region 145169
Tssr145170 17 51833020 to 51833037 17 + TSS region transcription start site region 145170
Tssr148684 17 51833075 to 51833103 28 - TSS region transcription start site region 148684
Tssr148685 17 51833113 to 51833138 25 - TSS region transcription start site region 148685
Tssr148686 17 51833205 to 51833246 41 - TSS region transcription start site region 148686
Tssr145171 17 51833242 to 51833261 19 + TSS region transcription start site region 145171
Tssr148687 17 51833250 to 51833270 20 - TSS region transcription start site region 148687
Tssr148688 17 51833278 to 51833299 21 - TSS region transcription start site region 148688
Tssr145172 17 51834462 to 51834471 9 + TSS region transcription start site region 145172
Gm16489 17 51841229 to 51852524 11295 protein coding gene predicted gene 16489
Gm37593 17 51842861 to 51846114 3253 + unclassified gene predicted gene, 37593
Gm37266 17 51850239 to 51852525 2286 + unclassified gene predicted gene, 37266
Tssr145173 17 51853154 to 51853161 7 + TSS region transcription start site region 145173
Gm37176 17 51859167 to 51863217 4050 + unclassified gene predicted gene, 37176
Tssr145174 17 51859596 to 51859597 1 + TSS region transcription start site region 145174
Tssr145175 17 51879882 to 51879906 24 + TSS region transcription start site region 145175
Tssr145176 17 51882691 to 51882706 15 + TSS region transcription start site region 145176
Gm20098 17 51882727 to 51965257 82530 + lincRNA gene predicted gene, 20098
Tssr148689 17 51899583 to 51899627 44 - TSS region transcription start site region 148689
Tssr148690 17 51903920 to 51903930 10 - TSS region transcription start site region 148690
Tssr148691 17 51903950 to 51903961 11 - TSS region transcription start site region 148691
Tssr145177 17 51904205 to 51904222 17 + TSS region transcription start site region 145177
Tssr148692 17 51945720 to 51945729 9 - TSS region transcription start site region 148692
Tssr148693 17 51956547 to 51956566 19 - TSS region transcription start site region 148693
Gm19197 17 52008967 to 52009569 602 + pseudogene predicted gene, 19197
Gm19585 17 52149244 to 52162930 13686 + lincRNA gene predicted gene, 19585
Tssr145178 17 52149285 to 52149295 10 + TSS region transcription start site region 145178
Tssr145179 17 52149305 to 52149339 34 + TSS region transcription start site region 145179
Tssr148694 17 52162631 to 52162640 9 - TSS region transcription start site region 148694
Tssr148695 17 52162650 to 52162678 28 - TSS region transcription start site region 148695
Tssr145180 17 52163132 to 52163139 7 + TSS region transcription start site region 145180
Tssr145181 17 52163221 to 52163232 11 + TSS region transcription start site region 145181
Tssr148696 17 52213022 to 52213036 14 - TSS region transcription start site region 148696
Tssr145182 17 52213156 to 52213170 14 + TSS region transcription start site region 145182
Tssr145183 17 52217656 to 52217667 11 + TSS region transcription start site region 145183
Tssr145184 17 52217681 to 52217694 13 + TSS region transcription start site region 145184
D17Mit237 17 52218243 to 52218350 107 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 237
Tssr145185 17 52280145 to 52280152 7 + TSS region transcription start site region 145185
Tssr145186 17 52282542 to 52282552 10 + TSS region transcription start site region 145186
Tssr145187 17 52282632 to 52282645 13 + TSS region transcription start site region 145187
Tssr148697 17 52285501 to 52285508 7 - TSS region transcription start site region 148697