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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:50691771-51782062

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hbnr7 17 42740294 to 51432094 8691800 QTL Heligmosomoides bakeri nematode resistance 7
Cpgi9308 17 50698508 to 50698704 196 CpG island CpG island 9308
Tssr145159 17 50698542 to 50698553 11 + TSS region transcription start site region 145159
Gm7334 17 50698688 to 50699443 755 + pseudogene predicted gene 7334
Tbc1d5 17 50733124 to 51179352 446228 - protein coding gene TBC1 domain family, member 5
Gm41598 17 50791436 to 50793590 2154 + lncRNA gene predicted gene, 41598
Gm31083 17 50879728 to 50899481 19753 + lncRNA gene predicted gene, 31083
Tssr148601 17 50879814 to 50879853 39 - TSS region transcription start site region 148601
Tssr5159 17 50891429 to 50891431 2 + TSS region transcription start site region 5159
Gm25177 17 50916925 to 50917041 116 - snRNA gene predicted gene, 25177
Tssr148602 17 50993677 to 50993688 11 - TSS region transcription start site region 148602
Tssr148603 17 51084260 to 51084264 4 - TSS region transcription start site region 148603
D17Mit9 17 51168551 to 51168656 105 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 9
Tssr148604 17 51171631 to 51171647 16 - TSS region transcription start site region 148604
Tssr148605 17 51175514 to 51175517 3 - TSS region transcription start site region 148605
Cpgi9309 17 51178509 to 51179787 1278 CpG island CpG island 9309
Tssr145160 17 51178699 to 51178752 53 + TSS region transcription start site region 145160
Tssr148606 17 51179249 to 51179343 94 - TSS region transcription start site region 148606
D17Mit179 17 51195070 to 51195249 179 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 179
Gm49908 17 51236771 to 51237062 291 - pseudogene predicted gene, 49908
C330011F03Rik 17 51425209 to 51435838 10629 - lincRNA gene RIKEN cDNA C330011F03 gene
Lfnq5 17 51431951 to 57227623 5795672 QTL lung function QTL 5
D17Mit180 17 51431951 to 51432094 143 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 180
Tssr145161 17 51435536 to 51435543 7 + TSS region transcription start site region 145161
Tssr145162 17 51479691 to 51479693 2 + TSS region transcription start site region 145162
Gm46574 17 51484292 to 51484721 429 - pseudogene predicted gene, 46574
Gm31143 17 51534258 to 51534745 487 - lincRNA gene predicted gene, 31143
Tssr145163 17 51569480 to 51569481 1 + TSS region transcription start site region 145163
Cpgi9310 17 51583325 to 51583539 214 CpG island CpG island 9310
Tssr5160 17 51642051 to 51642054 3 + TSS region transcription start site region 5160
Satb1 17 51736187 to 51833290 97103 - protein coding gene special AT-rich sequence binding protein 1
Tssr148607 17 51737847 to 51737858 11 - TSS region transcription start site region 148607
Tssr148608 17 51739678 to 51739695 17 - TSS region transcription start site region 148608
Tssr148609 17 51739923 to 51739938 15 - TSS region transcription start site region 148609
Tssr148610 17 51744959 to 51744962 3 - TSS region transcription start site region 148610
E430014B02Rik 17 51745529 to 51748684 3155 - unclassified gene RIKEN cDNA E430014B02 gene
Tssr148611 17 51746965 to 51746970 5 - TSS region transcription start site region 148611
Tssr148612 17 51747695 to 51747723 28 - TSS region transcription start site region 148612
Tssr148613 17 51751168 to 51751176 8 - TSS region transcription start site region 148613
Tssr148614 17 51752600 to 51752605 5 - TSS region transcription start site region 148614
Tssr5161 17 51755163 to 51755200 37 - TSS region transcription start site region 5161
Tssr148615 17 51756452 to 51756467 15 - TSS region transcription start site region 148615
C230085N15Rik 17 51757295 to 51761621 4326 - unclassified gene RIKEN cDNA C230085N15 gene
Tssr148616 17 51759403 to 51759414 11 - TSS region transcription start site region 148616
Tssr148617 17 51759547 to 51759549 2 - TSS region transcription start site region 148617
Tssr148618 17 51759808 to 51759814 6 - TSS region transcription start site region 148618
Tssr148619 17 51761801 to 51761804 3 - TSS region transcription start site region 148619
Tssr5162 17 51766605 to 51766616 11 - TSS region transcription start site region 5162
Gm36931 17 51766643 to 51771443 4800 - unclassified gene predicted gene, 36931
Tssr148620 17 51766754 to 51766767 13 - TSS region transcription start site region 148620
Tssr148621 17 51767498 to 51767501 3 - TSS region transcription start site region 148621
Tssr148622 17 51775199 to 51775209 10 - TSS region transcription start site region 148622
Tssr148623 17 51775452 to 51775462 10 - TSS region transcription start site region 148623
Tssr148624 17 51776534 to 51776539 5 - TSS region transcription start site region 148624
Tssr148625 17 51779048 to 51779051 3 - TSS region transcription start site region 148625