Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:50683124-51229352

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plcl2 17 50509403 to 50688484 179081 + protein coding gene phospholipase C-like 2
Cpgi9308 17 50698508 to 50698704 196 CpG island CpG island 9308
Tssr145159 17 50698542 to 50698553 11 + TSS region transcription start site region 145159
Gm7334 17 50698688 to 50699443 755 + pseudogene predicted gene 7334
Tbc1d5 17 50733124 to 51179352 446228 - protein coding gene TBC1 domain family, member 5
Gm41598 17 50791436 to 50793590 2154 + lncRNA gene predicted gene, 41598
Gm31083 17 50879728 to 50899481 19753 + lncRNA gene predicted gene, 31083
Tssr148601 17 50879814 to 50879853 39 - TSS region transcription start site region 148601
Tssr5159 17 50891429 to 50891431 2 + TSS region transcription start site region 5159
Gm25177 17 50916925 to 50917041 116 - snRNA gene predicted gene, 25177
Tssr148602 17 50993677 to 50993688 11 - TSS region transcription start site region 148602
Tssr148603 17 51084260 to 51084264 4 - TSS region transcription start site region 148603
D17Mit9 17 51168551 to 51168656 105 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 9
Tssr148604 17 51171631 to 51171647 16 - TSS region transcription start site region 148604
Tssr148605 17 51175514 to 51175517 3 - TSS region transcription start site region 148605
Cpgi9309 17 51178509 to 51179787 1278 CpG island CpG island 9309
Tssr145160 17 51178699 to 51178752 53 + TSS region transcription start site region 145160
Tssr148606 17 51179249 to 51179343 94 - TSS region transcription start site region 148606
D17Mit179 17 51195070 to 51195249 179 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 179