Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:50601534-52951539

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213 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcal2 17 26182038 to 52604676 26422638 QTL kilocalorie 2
Hbnr7 17 42740294 to 51432094 8691800 QTL Heligmosomoides bakeri nematode resistance 7
Obrq14 17 48706312 to 52659396 3953084 QTL obesity resistance QTL 14
Plcl2 17 50509403 to 50688484 179081 + protein coding gene phospholipase C-like 2
Cpgi9306 17 50608373 to 50608571 198 CpG island CpG island 9306
Tssr145158 17 50643093 to 50643105 12 + TSS region transcription start site region 145158
Tssr148600 17 50668973 to 50668976 3 - TSS region transcription start site region 148600
Cpgi9307 17 50677451 to 50677625 174 CpG island CpG island 9307
Cpgi9308 17 50698508 to 50698704 196 CpG island CpG island 9308
Tssr145159 17 50698542 to 50698553 11 + TSS region transcription start site region 145159
Gm7334 17 50698688 to 50699443 755 + pseudogene predicted gene 7334
Tbc1d5 17 50733124 to 51179352 446228 - protein coding gene TBC1 domain family, member 5
Gm41598 17 50791436 to 50793590 2154 + lncRNA gene predicted gene, 41598
Gm31083 17 50879728 to 50899481 19753 + lncRNA gene predicted gene, 31083
Tssr148601 17 50879814 to 50879853 39 - TSS region transcription start site region 148601
Tssr5159 17 50891429 to 50891431 2 + TSS region transcription start site region 5159
Gm25177 17 50916925 to 50917041 116 - snRNA gene predicted gene, 25177
Tssr148602 17 50993677 to 50993688 11 - TSS region transcription start site region 148602
Tssr148603 17 51084260 to 51084264 4 - TSS region transcription start site region 148603
D17Mit9 17 51168551 to 51168656 105 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 9
Tssr148604 17 51171631 to 51171647 16 - TSS region transcription start site region 148604
Tssr148605 17 51175514 to 51175517 3 - TSS region transcription start site region 148605
Cpgi9309 17 51178509 to 51179787 1278 CpG island CpG island 9309
Tssr145160 17 51178699 to 51178752 53 + TSS region transcription start site region 145160
Tssr148606 17 51179249 to 51179343 94 - TSS region transcription start site region 148606
D17Mit179 17 51195070 to 51195249 179 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 179
Gm49908 17 51236771 to 51237062 291 - pseudogene predicted gene, 49908
C330011F03Rik 17 51425209 to 51435838 10629 - lincRNA gene RIKEN cDNA C330011F03 gene
D17Mit180 17 51431951 to 51432094 143 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 180
Lfnq5 17 51431951 to 57227623 5795672 QTL lung function QTL 5
Tssr145161 17 51435536 to 51435543 7 + TSS region transcription start site region 145161
Tssr145162 17 51479691 to 51479693 2 + TSS region transcription start site region 145162
Gm46574 17 51484292 to 51484721 429 - pseudogene predicted gene, 46574
Gm31143 17 51534258 to 51534745 487 - lincRNA gene predicted gene, 31143
Tssr145163 17 51569480 to 51569481 1 + TSS region transcription start site region 145163
Cpgi9310 17 51583325 to 51583539 214 CpG island CpG island 9310
Tssr5160 17 51642051 to 51642054 3 + TSS region transcription start site region 5160
Satb1 17 51736187 to 51833290 97103 - protein coding gene special AT-rich sequence binding protein 1
Tssr148607 17 51737847 to 51737858 11 - TSS region transcription start site region 148607
Tssr148608 17 51739678 to 51739695 17 - TSS region transcription start site region 148608
Tssr148609 17 51739923 to 51739938 15 - TSS region transcription start site region 148609
Tssr148610 17 51744959 to 51744962 3 - TSS region transcription start site region 148610
E430014B02Rik 17 51745529 to 51748684 3155 - unclassified gene RIKEN cDNA E430014B02 gene
Tssr148611 17 51746965 to 51746970 5 - TSS region transcription start site region 148611
Tssr148612 17 51747695 to 51747723 28 - TSS region transcription start site region 148612
Tssr148613 17 51751168 to 51751176 8 - TSS region transcription start site region 148613
Tssr148614 17 51752600 to 51752605 5 - TSS region transcription start site region 148614
Tssr5161 17 51755163 to 51755200 37 - TSS region transcription start site region 5161
Tssr148615 17 51756452 to 51756467 15 - TSS region transcription start site region 148615
C230085N15Rik 17 51757295 to 51761621 4326 - unclassified gene RIKEN cDNA C230085N15 gene
Tssr148616 17 51759403 to 51759414 11 - TSS region transcription start site region 148616
Tssr148617 17 51759547 to 51759549 2 - TSS region transcription start site region 148617
Tssr148618 17 51759808 to 51759814 6 - TSS region transcription start site region 148618
Tssr148619 17 51761801 to 51761804 3 - TSS region transcription start site region 148619
Tssr5162 17 51766605 to 51766616 11 - TSS region transcription start site region 5162
Gm36931 17 51766643 to 51771443 4800 - unclassified gene predicted gene, 36931
Tssr148620 17 51766754 to 51766767 13 - TSS region transcription start site region 148620
Tssr148621 17 51767498 to 51767501 3 - TSS region transcription start site region 148621
Tssr148622 17 51775199 to 51775209 10 - TSS region transcription start site region 148622
Tssr148623 17 51775452 to 51775462 10 - TSS region transcription start site region 148623
Tssr148624 17 51776534 to 51776539 5 - TSS region transcription start site region 148624
Tssr148625 17 51779048 to 51779051 3 - TSS region transcription start site region 148625
Tssr148626 17 51782603 to 51782615 12 - TSS region transcription start site region 148626
Tssr148627 17 51782893 to 51782904 11 - TSS region transcription start site region 148627
Tssr148628 17 51782923 to 51782949 26 - TSS region transcription start site region 148628
Tssr148629 17 51787025 to 51787043 18 - TSS region transcription start site region 148629
Tssr148630 17 51790201 to 51790204 3 - TSS region transcription start site region 148630
5830444F18Rik 17 51791470 to 51793461 1991 - unclassified gene RIKEN cDNA 5830444F18 gene
Tssr148631 17 51792385 to 51792387 2 - TSS region transcription start site region 148631
Tssr148632 17 51793908 to 51793918 10 - TSS region transcription start site region 148632
Tssr148633 17 51794243 to 51794252 9 - TSS region transcription start site region 148633
Tssr148634 17 51795602 to 51795632 30 - TSS region transcription start site region 148634
Tssr148635 17 51795635 to 51795642 7 - TSS region transcription start site region 148635
Gm37248 17 51796017 to 51799190 3173 - unclassified gene predicted gene, 37248
Tssr148636 17 51796138 to 51796166 28 - TSS region transcription start site region 148636
Tssr148637 17 51796280 to 51796319 39 - TSS region transcription start site region 148637
Tssr148638 17 51796389 to 51796401 12 - TSS region transcription start site region 148638
Tssr148639 17 51796475 to 51796493 18 - TSS region transcription start site region 148639
Tssr148640 17 51797029 to 51797038 9 - TSS region transcription start site region 148640
Tssr148641 17 51797070 to 51797080 10 - TSS region transcription start site region 148641
Tssr148642 17 51797598 to 51797610 12 - TSS region transcription start site region 148642
Tssr148643 17 51798300 to 51798306 6 - TSS region transcription start site region 148643
Tssr148644 17 51804259 to 51804270 11 - TSS region transcription start site region 148644
Tssr148645 17 51805236 to 51805249 13 - TSS region transcription start site region 148645
Tssr148646 17 51810866 to 51810873 7 - TSS region transcription start site region 148646
Tssr148647 17 51812045 to 51812057 12 - TSS region transcription start site region 148647
Tssr148648 17 51812058 to 51812084 26 - TSS region transcription start site region 148648
Tssr148649 17 51812309 to 51812326 17 - TSS region transcription start site region 148649
Tssr148650 17 51812337 to 51812345 8 - TSS region transcription start site region 148650
Cpgi9311 17 51812346 to 51813827 1481 CpG island CpG island 9311
Tssr148651 17 51813212 to 51813227 15 - TSS region transcription start site region 148651
Tssr148652 17 51813292 to 51813355 63 - TSS region transcription start site region 148652
Tssr5163 17 51813486 to 51813519 33 - TSS region transcription start site region 5163
Tssr148653 17 51813531 to 51813551 20 - TSS region transcription start site region 148653
Tssr148654 17 51813568 to 51813579 11 - TSS region transcription start site region 148654
Tssr148655 17 51813825 to 51813832 7 - TSS region transcription start site region 148655
Tssr148656 17 51813872 to 51813883 11 - TSS region transcription start site region 148656
Tssr148657 17 51813905 to 51813916 11 - TSS region transcription start site region 148657
Tssr148658 17 51814229 to 51814236 7 - TSS region transcription start site region 148658
Tssr148659 17 51814291 to 51814303 12 - TSS region transcription start site region 148659
Tssr148660 17 51814462 to 51814487 25 - TSS region transcription start site region 148660
Tssr148661 17 51814609 to 51814624 15 - TSS region transcription start site region 148661
Tssr148662 17 51815313 to 51815330 17 - TSS region transcription start site region 148662
Tssr148663 17 51815802 to 51815811 9 - TSS region transcription start site region 148663
Tssr148664 17 51815825 to 51815834 9 - TSS region transcription start site region 148664
Tssr148665 17 51815989 to 51816016 27 - TSS region transcription start site region 148665
Tssr148666 17 51816912 to 51816923 11 - TSS region transcription start site region 148666
Tssr148667 17 51822403 to 51822406 3 - TSS region transcription start site region 148667
Tssr148668 17 51823385 to 51823389 4 - TSS region transcription start site region 148668
Tssr148669 17 51823528 to 51823530 2 - TSS region transcription start site region 148669
Tssr148670 17 51824791 to 51824802 11 - TSS region transcription start site region 148670
Tssr148671 17 51825222 to 51825233 11 - TSS region transcription start site region 148671
Tssr148672 17 51826290 to 51826293 3 - TSS region transcription start site region 148672
Tssr148673 17 51826535 to 51826551 16 - TSS region transcription start site region 148673
Tssr148674 17 51826578 to 51826601 23 - TSS region transcription start site region 148674
Tssr148675 17 51826603 to 51826635 32 - TSS region transcription start site region 148675
Tssr148676 17 51826689 to 51826700 11 - TSS region transcription start site region 148676
Tssr145164 17 51826722 to 51826741 19 + TSS region transcription start site region 145164
Tssr148677 17 51829523 to 51829537 14 - TSS region transcription start site region 148677
Tssr148678 17 51829616 to 51829626 10 - TSS region transcription start site region 148678
Tssr145165 17 51829665 to 51829684 19 + TSS region transcription start site region 145165
Cpgi9312 17 51831455 to 51833631 2176 CpG island CpG island 9312
Tssr148679 17 51831884 to 51831895 11 - TSS region transcription start site region 148679
Tssr148680 17 51832607 to 51832633 26 - TSS region transcription start site region 148680
Tssr148681 17 51832635 to 51832654 19 - TSS region transcription start site region 148681
Tssr148682 17 51832666 to 51832678 12 - TSS region transcription start site region 148682
Tssr148683 17 51832692 to 51832697 5 - TSS region transcription start site region 148683
Tssr145166 17 51832757 to 51832777 20 + TSS region transcription start site region 145166
Tssr145167 17 51832778 to 51832800 22 + TSS region transcription start site region 145167
Tssr145168 17 51832815 to 51832825 10 + TSS region transcription start site region 145168
Gm6934 17 51832819 to 51834723 1904 + protein coding gene predicted gene 6934
Tssr145169 17 51833007 to 51833017 10 + TSS region transcription start site region 145169
Tssr145170 17 51833020 to 51833037 17 + TSS region transcription start site region 145170
Tssr148684 17 51833075 to 51833103 28 - TSS region transcription start site region 148684
Tssr148685 17 51833113 to 51833138 25 - TSS region transcription start site region 148685
Tssr148686 17 51833205 to 51833246 41 - TSS region transcription start site region 148686
Tssr145171 17 51833242 to 51833261 19 + TSS region transcription start site region 145171
Tssr148687 17 51833250 to 51833270 20 - TSS region transcription start site region 148687
Tssr148688 17 51833278 to 51833299 21 - TSS region transcription start site region 148688
Tssr145172 17 51834462 to 51834471 9 + TSS region transcription start site region 145172
Gm16489 17 51841229 to 51852524 11295 protein coding gene predicted gene 16489
Gm37593 17 51842861 to 51846114 3253 + unclassified gene predicted gene, 37593
Gm37266 17 51850239 to 51852525 2286 + unclassified gene predicted gene, 37266
Tssr145173 17 51853154 to 51853161 7 + TSS region transcription start site region 145173
Gm37176 17 51859167 to 51863217 4050 + unclassified gene predicted gene, 37176
Tssr145174 17 51859596 to 51859597 1 + TSS region transcription start site region 145174
Tssr145175 17 51879882 to 51879906 24 + TSS region transcription start site region 145175
Tssr145176 17 51882691 to 51882706 15 + TSS region transcription start site region 145176
Gm20098 17 51882727 to 51965257 82530 + lincRNA gene predicted gene, 20098
Tssr148689 17 51899583 to 51899627 44 - TSS region transcription start site region 148689
Tssr148690 17 51903920 to 51903930 10 - TSS region transcription start site region 148690
Tssr148691 17 51903950 to 51903961 11 - TSS region transcription start site region 148691
Tssr145177 17 51904205 to 51904222 17 + TSS region transcription start site region 145177
Tssr148692 17 51945720 to 51945729 9 - TSS region transcription start site region 148692
Tssr148693 17 51956547 to 51956566 19 - TSS region transcription start site region 148693
Gm19197 17 52008967 to 52009569 602 + pseudogene predicted gene, 19197
Gm19585 17 52149244 to 52162930 13686 + lincRNA gene predicted gene, 19585
Tssr145178 17 52149285 to 52149295 10 + TSS region transcription start site region 145178
Tssr145179 17 52149305 to 52149339 34 + TSS region transcription start site region 145179
Tssr148694 17 52162631 to 52162640 9 - TSS region transcription start site region 148694
Tssr148695 17 52162650 to 52162678 28 - TSS region transcription start site region 148695
Tssr145180 17 52163132 to 52163139 7 + TSS region transcription start site region 145180
Tssr145181 17 52163221 to 52163232 11 + TSS region transcription start site region 145181
Tssr148696 17 52213022 to 52213036 14 - TSS region transcription start site region 148696
Tssr145182 17 52213156 to 52213170 14 + TSS region transcription start site region 145182
Tssr145183 17 52217656 to 52217667 11 + TSS region transcription start site region 145183
Tssr145184 17 52217681 to 52217694 13 + TSS region transcription start site region 145184
D17Mit237 17 52218243 to 52218350 107 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 237
Tssr145185 17 52280145 to 52280152 7 + TSS region transcription start site region 145185
Tssr145186 17 52282542 to 52282552 10 + TSS region transcription start site region 145186
Tssr145187 17 52282632 to 52282645 13 + TSS region transcription start site region 145187
Tssr148697 17 52285501 to 52285508 7 - TSS region transcription start site region 148697
Tssr145188 17 52304066 to 52304068 2 + TSS region transcription start site region 145188
Gm41600 17 52304434 to 52326312 21878 + lincRNA gene predicted gene, 41600
Tssr145189 17 52304472 to 52304498 26 + TSS region transcription start site region 145189
Tssr145190 17 52304499 to 52304515 16 + TSS region transcription start site region 145190
Tssr145191 17 52304522 to 52304537 15 + TSS region transcription start site region 145191
Tssr145192 17 52304540 to 52304549 9 + TSS region transcription start site region 145192
Tssr148698 17 52306621 to 52306623 2 - TSS region transcription start site region 148698
Tssr145193 17 52307574 to 52307622 48 + TSS region transcription start site region 145193
Tssr145194 17 52307706 to 52307717 11 + TSS region transcription start site region 145194
Tssr145195 17 52309899 to 52309904 5 + TSS region transcription start site region 145195
Tssr148699 17 52312165 to 52312181 16 - TSS region transcription start site region 148699
Gm49912 17 52312191 to 52350056 37865 - lincRNA gene predicted gene, 49912
Tssr148700 17 52312204 to 52312220 16 - TSS region transcription start site region 148700
Tssr148701 17 52348642 to 52348658 16 - TSS region transcription start site region 148701
Tssr145196 17 52348716 to 52348731 15 + TSS region transcription start site region 145196
Tssr148702 17 52350013 to 52350022 9 - TSS region transcription start site region 148702
Tssr5164 17 52350042 to 52350047 5 - TSS region transcription start site region 5164
Tssr148703 17 52350050 to 52350061 11 - TSS region transcription start site region 148703
Tssr145197 17 52351510 to 52351543 33 + TSS region transcription start site region 145197
Gm5094 17 52452575 to 52461765 9190 - lincRNA gene predicted gene 5094
Tssr145198 17 52457174 to 52457177 3 + TSS region transcription start site region 145198
Tssr145199 17 52458680 to 52458691 11 + TSS region transcription start site region 145199
Tssr145200 17 52468773 to 52468793 20 + TSS region transcription start site region 145200
Tssr145201 17 52468796 to 52468809 13 + TSS region transcription start site region 145201
Gm27217 17 52593393 to 52602660 9267 - antisense lncRNA gene predicted gene 27217
Cpgi9313 17 52601039 to 52601476 437 CpG island CpG island 9313
Cpgi9314 17 52602183 to 52602969 786 CpG island CpG island 9314
Tssr145202 17 52602242 to 52602284 42 + TSS region transcription start site region 145202