MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:50325148-50515195

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm49906	17	50339252 to 50398475	59223	+	lincRNA gene	predicted gene, 49906
Gm30958	17	50377591 to 50384177	6586	-	lncRNA gene	predicted gene, 30958
Tssr148596	17	50420135 to 50420144	9	-	TSS region	transcription start site region 148596
Tssr148597	17	50420148 to 50420195	47	-	TSS region	transcription start site region 148597
Gm31015	17	50424154 to 50430476	6322	+	lncRNA gene	predicted gene, 31015
Tssr148598	17	50455876 to 50455918	42	-	TSS region	transcription start site region 148598
Tssr145141	17	50470669 to 50470706	37	+	TSS region	transcription start site region 145141
Tssr148599	17	50495390 to 50495399	9	-	TSS region	transcription start site region 148599
Tssr145142	17	50508248 to 50508260	12	+	TSS region	transcription start site region 145142
Cpgi9305	17	50508500 to 50510228	1728		CpG island	CpG island 9305
Tssr145143	17	50508893 to 50508928	35	+	TSS region	transcription start site region 145143
Tssr145144	17	50509075 to 50509098	23	+	TSS region	transcription start site region 145144
Tssr145145	17	50509270 to 50509354	84	+	TSS region	transcription start site region 145145
Plcl2	17	50509403 to 50688484	179081	+	protein coding gene	phospholipase C-like 2
Tssr145146	17	50509518 to 50509553	35	+	TSS region	transcription start site region 145146
Tssr145147	17	50509556 to 50509597	41	+	TSS region	transcription start site region 145147
Tssr145148	17	50509750 to 50509793	43	+	TSS region	transcription start site region 145148
Tssr145149	17	50513205 to 50513209	4	+	TSS region	transcription start site region 145149