MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:49695897-50106068

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Kif6	17	49615136 to 49909847	294711	+	protein coding gene	kinesin family member 6
Tssr5157	17	49738732 to 49738745	13	+	TSS region	transcription start site region 5157
Tssr148567	17	49796283 to 49796286	3	-	TSS region	transcription start site region 148567
Gm16555	17	49817789 to 49821573	3784	-	antisense lncRNA gene	predicted gene 16555
Tssr148568	17	49821792 to 49821838	46	-	TSS region	transcription start site region 148568
D17Mit106	17	49860455 to 49860604	149		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 106
Gm16554	17	49894742 to 49895967	1225	-	antisense lncRNA gene	predicted gene 16554
Cpgi9302	17	49900897 to 49901068	171		CpG island	CpG island 9302
Gm19465	17	49927094 to 49931821	4727	+	protein coding gene	predicted gene, 19465
Gm49899	17	49930028 to 49930151	123	+	pseudogene	predicted gene, 49899
Gm49900	17	49931075 to 49931318	243	+	pseudogene	predicted gene, 49900
Tssr5158	17	49957537 to 49957546	9	+	TSS region	transcription start site region 5158
Rftn1	17	49993258 to 50190497	197239	-	protein coding gene	raftlin lipid raft linker 1
Tssr148569	17	50091610 to 50091624	14	-	TSS region	transcription start site region 148569
Tssr148570	17	50094254 to 50094274	20	-	TSS region	transcription start site region 148570
Tssr148571	17	50094277 to 50094288	11	-	TSS region	transcription start site region 148571
Tssr148572	17	50101174 to 50101193	19	-	TSS region	transcription start site region 148572
Tssr148573	17	50101339 to 50101376	37	-	TSS region	transcription start site region 148573