Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:49545455-50175604

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Daam2 17 49456022 to 49564343 108321 - protein coding gene dishevelled associated activator of morphogenesis 2
Tssr148563 17 49550028 to 49550035 7 - TSS region transcription start site region 148563
Tssr148564 17 49550101 to 49550117 16 - TSS region transcription start site region 148564
D17Mit84 17 49552972 to 49553083 111 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 84
Cpgi9300 17 49563872 to 49564588 716 CpG island CpG island 9300
Tssr148565 17 49564262 to 49564322 60 - TSS region transcription start site region 148565
D17Mit108 17 49605221 to 49605333 112 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 108
Cpgi9301 17 49614893 to 49615691 798 CpG island CpG island 9301
Tssr145134 17 49615104 to 49615151 47 + TSS region transcription start site region 145134
Kif6 17 49615136 to 49909847 294711 + protein coding gene kinesin family member 6
Tssr148566 17 49676480 to 49676486 6 - TSS region transcription start site region 148566
Tssr5157 17 49738732 to 49738745 13 + TSS region transcription start site region 5157
Tssr148567 17 49796283 to 49796286 3 - TSS region transcription start site region 148567
Gm16555 17 49817789 to 49821573 3784 - antisense lncRNA gene predicted gene 16555
Tssr148568 17 49821792 to 49821838 46 - TSS region transcription start site region 148568
D17Mit106 17 49860455 to 49860604 149 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 106
Gm16554 17 49894742 to 49895967 1225 - antisense lncRNA gene predicted gene 16554
Cpgi9302 17 49900897 to 49901068 171 CpG island CpG island 9302
Gm19465 17 49927094 to 49931821 4727 + protein coding gene predicted gene, 19465
Gm49899 17 49930028 to 49930151 123 + pseudogene predicted gene, 49899
Gm49900 17 49931075 to 49931318 243 + pseudogene predicted gene, 49900
Tssr5158 17 49957537 to 49957546 9 + TSS region transcription start site region 5158
Rftn1 17 49993258 to 50190497 197239 - protein coding gene raftlin lipid raft linker 1
Tssr148569 17 50091610 to 50091624 14 - TSS region transcription start site region 148569
Tssr148570 17 50094254 to 50094274 20 - TSS region transcription start site region 148570
Tssr148571 17 50094277 to 50094288 11 - TSS region transcription start site region 148571
Tssr148572 17 50101174 to 50101193 19 - TSS region transcription start site region 148572
Tssr148573 17 50101339 to 50101376 37 - TSS region transcription start site region 148573
Gm49901 17 50114019 to 50117459 3440 + lincRNA gene predicted gene, 49901
Tssr148574 17 50124298 to 50124314 16 - TSS region transcription start site region 148574
D17Mit117 17 50131150 to 50131271 121 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 117
Tssr148575 17 50136836 to 50136849 13 - TSS region transcription start site region 148575
Tssr148576 17 50154892 to 50154906 14 - TSS region transcription start site region 148576
Tssr148577 17 50156172 to 50156205 33 - TSS region transcription start site region 148577
Tssr148578 17 50156231 to 50156252 21 - TSS region transcription start site region 148578
Tssr148579 17 50157399 to 50157407 8 - TSS region transcription start site region 148579
Tssr148580 17 50158813 to 50158825 12 - TSS region transcription start site region 148580
Tssr148581 17 50164091 to 50164111 20 - TSS region transcription start site region 148581
Tssr148582 17 50164144 to 50164146 2 - TSS region transcription start site region 148582
Tssr148583 17 50164176 to 50164232 56 - TSS region transcription start site region 148583
Tssr148584 17 50164309 to 50164325 16 - TSS region transcription start site region 148584
Tssr148585 17 50169893 to 50169925 32 - TSS region transcription start site region 148585