Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:48952119-49222124

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq4 17 44705665 to 49059374 4353709 QTL conditioned fear QTL 4
Lrfn2 17 48932379 to 49097588 165209 + protein coding gene leucine rich repeat and fibronectin type III domain containing 2
Tssr148551 17 48963877 to 48963903 26 - TSS region transcription start site region 148551
Tssr145123 17 48974054 to 48974067 13 + TSS region transcription start site region 145123
Tssr145124 17 49004187 to 49004190 3 + TSS region transcription start site region 145124
Tssr148552 17 49009741 to 49009775 34 - TSS region transcription start site region 148552
Tssr148553 17 49033296 to 49033344 48 - TSS region transcription start site region 148553
Tssr145125 17 49087119 to 49087124 5 + TSS region transcription start site region 145125
Gm44304 17 49096289 to 49096433 144 - miRNA gene predicted gene, 44304
1700008K24Rik 17 49112264 to 49113533 1269 - lincRNA gene RIKEN cDNA 1700008K24 gene
Tssr148554 17 49113466 to 49113469 3 - TSS region transcription start site region 148554
Tssr148555 17 49113477 to 49113520 43 - TSS region transcription start site region 148555
Tssr148556 17 49113526 to 49113533 7 - TSS region transcription start site region 148556
Tssr5156 17 49117628 to 49117630 2 + TSS region transcription start site region 5156
Gm9586 17 49164711 to 49165758 1047 - pseudogene predicted gene 9586
Gm30475 17 49167315 to 49172769 5454 - lncRNA gene predicted gene, 30475
Cpgi9297 17 49171659 to 49171940 281 CpG island CpG island 9297
Cpgi9298 17 49212813 to 49213102 289 CpG island CpG island 9298