Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:48559854-49029867

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49896 17 48556733 to 48572187 15454 + lincRNA gene predicted gene, 49896
Gm30419 17 48582943 to 48584111 1168 + lncRNA gene predicted gene, 30419
Tssr5155 17 48605397 to 48605402 5 + TSS region transcription start site region 5155
Cpgi9295 17 48611062 to 48611816 754 CpG island CpG island 9295
Gm24071 17 48617823 to 48617954 131 + snoRNA gene predicted gene, 24071
Tssr148547 17 48647662 to 48647679 17 - TSS region transcription start site region 148547
Tssr148548 17 48682969 to 48682970 1 - TSS region transcription start site region 148548
Gm23642 17 48692450 to 48692707 257 - unclassified non-coding RNA gene predicted gene, 23642
D17Mit178 17 48706312 to 48706448 136 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 178
D17Dcr13 17 48706312 to 48706430 118 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 13
Obrq14 17 48706312 to 52659396 3953084 QTL obesity resistance QTL 14
Gm45330 17 48730399 to 48738746 8347 - lincRNA gene predicted gene 45330
Tssr148549 17 48738730 to 48738758 28 - TSS region transcription start site region 148549
Tssr148550 17 48794854 to 48794867 13 - TSS region transcription start site region 148550
D17Mit157 17 48868903 to 48869080 177 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 157
Cpgi9296 17 48931446 to 48933340 1894 CpG island CpG island 9296
Tssr145121 17 48931801 to 48931813 12 + TSS region transcription start site region 145121
Tssr145122 17 48932368 to 48932399 31 + TSS region transcription start site region 145122
Lrfn2 17 48932379 to 49097588 165209 + protein coding gene leucine rich repeat and fibronectin type III domain containing 2
Tssr148551 17 48963877 to 48963903 26 - TSS region transcription start site region 148551
Tssr145123 17 48974054 to 48974067 13 + TSS region transcription start site region 145123
Tssr145124 17 49004187 to 49004190 3 + TSS region transcription start site region 145124
Tssr148552 17 49009741 to 49009775 34 - TSS region transcription start site region 148552