Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:48515399-48953746

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bhr3 17 3924615 to 48559063 44634448 QTL bronchial hyperresponsiveness 3
Unc5cl 17 48454901 to 48539714 84813 + protein coding gene unc-5 family C-terminal like
Tssr5154 17 48518047 to 48518050 3 - TSS region transcription start site region 5154
Cpgi9293 17 48539455 to 48539664 209 CpG island CpG island 9293
Cpgi9294 17 48545643 to 48546150 507 CpG island CpG island 9294
Gm49896 17 48556733 to 48572187 15454 + lincRNA gene predicted gene, 49896
D17Mit177 17 48558951 to 48559063 112 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 177
Gm30419 17 48582943 to 48584111 1168 + lncRNA gene predicted gene, 30419
Tssr5155 17 48605397 to 48605402 5 + TSS region transcription start site region 5155
Cpgi9295 17 48611062 to 48611816 754 CpG island CpG island 9295
Gm24071 17 48617823 to 48617954 131 + snoRNA gene predicted gene, 24071
Tssr148547 17 48647662 to 48647679 17 - TSS region transcription start site region 148547
Tssr148548 17 48682969 to 48682970 1 - TSS region transcription start site region 148548
Gm23642 17 48692450 to 48692707 257 - unclassified non-coding RNA gene predicted gene, 23642
D17Mit178 17 48706312 to 48706448 136 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 178
Obrq14 17 48706312 to 52659396 3953084 QTL obesity resistance QTL 14
D17Dcr13 17 48706312 to 48706430 118 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 13
Gm45330 17 48730399 to 48738746 8347 - lincRNA gene predicted gene 45330
Tssr148549 17 48738730 to 48738758 28 - TSS region transcription start site region 148549
Tssr148550 17 48794854 to 48794867 13 - TSS region transcription start site region 148550
D17Mit157 17 48868903 to 48869080 177 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 157
Cpgi9296 17 48931446 to 48933340 1894 CpG island CpG island 9296
Tssr145121 17 48931801 to 48931813 12 + TSS region transcription start site region 145121
Tssr145122 17 48932368 to 48932399 31 + TSS region transcription start site region 145122
Lrfn2 17 48932379 to 49097588 165209 + protein coding gene leucine rich repeat and fibronectin type III domain containing 2