Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:48437823-48797954

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bhr3 17 3924615 to 48559063 44634448 QTL bronchial hyperresponsiveness 3
D17Mit236 17 48444812 to 48444903 91 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 236
Tssr148542 17 48445907 to 48445908 1 - TSS region transcription start site region 148542
Tspo2 17 48447907 to 48451522 3615 - protein coding gene translocator protein 2
Tssr148543 17 48450780 to 48450796 16 - TSS region transcription start site region 148543
Tssr145118 17 48450931 to 48450945 14 + TSS region transcription start site region 145118
Tssr148544 17 48451479 to 48451509 30 - TSS region transcription start site region 148544
Tssr148545 17 48451510 to 48451530 20 - TSS region transcription start site region 148545
Tssr148546 17 48451533 to 48451536 3 - TSS region transcription start site region 148546
Tssr145119 17 48454891 to 48454907 16 + TSS region transcription start site region 145119
Unc5cl 17 48454901 to 48539714 84813 + protein coding gene unc-5 family C-terminal like
Tssr145120 17 48462355 to 48462409 54 + TSS region transcription start site region 145120
Tssr5153 17 48501998 to 48502000 2 + TSS region transcription start site region 5153
Tssr5154 17 48518047 to 48518050 3 - TSS region transcription start site region 5154
Cpgi9293 17 48539455 to 48539664 209 CpG island CpG island 9293
Cpgi9294 17 48545643 to 48546150 507 CpG island CpG island 9294
Gm49896 17 48556733 to 48572187 15454 + lincRNA gene predicted gene, 49896
D17Mit177 17 48558951 to 48559063 112 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 177
Gm30419 17 48582943 to 48584111 1168 + lncRNA gene predicted gene, 30419
Tssr5155 17 48605397 to 48605402 5 + TSS region transcription start site region 5155
Cpgi9295 17 48611062 to 48611816 754 CpG island CpG island 9295
Gm24071 17 48617823 to 48617954 131 + snoRNA gene predicted gene, 24071
Tssr148547 17 48647662 to 48647679 17 - TSS region transcription start site region 148547
Tssr148548 17 48682969 to 48682970 1 - TSS region transcription start site region 148548
Gm23642 17 48692450 to 48692707 257 - unclassified non-coding RNA gene predicted gene, 23642
Obrq14 17 48706312 to 52659396 3953084 QTL obesity resistance QTL 14
D17Mit178 17 48706312 to 48706448 136 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 178
D17Dcr13 17 48706312 to 48706430 118 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 13
Gm45330 17 48730399 to 48738746 8347 - lincRNA gene predicted gene 45330
Tssr148549 17 48738730 to 48738758 28 - TSS region transcription start site region 148549
Tssr148550 17 48794854 to 48794867 13 - TSS region transcription start site region 148550