Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:48338596-48438609

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trem2 17 48346401 to 48352276 5875 + protein coding gene triggering receptor expressed on myeloid cells 2
Tssr145093 17 48346406 to 48346417 11 + TSS region transcription start site region 145093
Tssr145094 17 48346433 to 48346445 12 + TSS region transcription start site region 145094
Tssr145095 17 48346465 to 48346493 28 + TSS region transcription start site region 145095
Tssr145096 17 48346498 to 48346526 28 + TSS region transcription start site region 145096
Tssr145097 17 48347501 to 48347531 30 + TSS region transcription start site region 145097
Tssr145098 17 48347828 to 48347873 45 + TSS region transcription start site region 145098
Tssr145099 17 48348480 to 48348499 19 + TSS region transcription start site region 145099
Tssr145100 17 48348509 to 48348525 16 + TSS region transcription start site region 145100
Tssr145101 17 48348546 to 48348566 20 + TSS region transcription start site region 145101
Tssr145102 17 48348645 to 48348680 35 + TSS region transcription start site region 145102
Tssr148525 17 48348690 to 48348736 46 - TSS region transcription start site region 148525
Tssr145103 17 48351136 to 48351170 34 + TSS region transcription start site region 145103
Tssr145104 17 48351704 to 48351720 16 + TSS region transcription start site region 145104
Tssr145105 17 48351741 to 48351785 44 + TSS region transcription start site region 145105
Tssr148526 17 48351757 to 48351786 29 - TSS region transcription start site region 148526
Tssr145106 17 48351834 to 48351846 12 + TSS region transcription start site region 145106
Tssr145107 17 48351849 to 48351872 23 + TSS region transcription start site region 145107
Tssr145108 17 48352025 to 48352105 80 + TSS region transcription start site region 145108
Tssr148527 17 48352265 to 48352272 7 - TSS region transcription start site region 148527
Tssr145109 17 48359891 to 48359926 35 + TSS region transcription start site region 145109
Treml1 17 48359916 to 48367176 7260 + protein coding gene triggering receptor expressed on myeloid cells-like 1
Nfya 17 48386885 to 48409901 23016 - protein coding gene nuclear transcription factor-Y alpha
Tssr148528 17 48387966 to 48387992 26 - TSS region transcription start site region 148528
Tssr148529 17 48387996 to 48388017 21 - TSS region transcription start site region 148529
Tssr148530 17 48388148 to 48388162 14 - TSS region transcription start site region 148530
Tssr148531 17 48388393 to 48388404 11 - TSS region transcription start site region 148531
Tssr148532 17 48388596 to 48388609 13 - TSS region transcription start site region 148532
Cpgi9291 17 48408931 to 48410448 1517 CpG island CpG island 9291
Tssr148533 17 48408985 to 48408996 11 - TSS region transcription start site region 148533
Tssr148534 17 48409010 to 48409027 17 - TSS region transcription start site region 148534
Tssr145110 17 48409173 to 48409178 5 + TSS region transcription start site region 145110
Tssr148535 17 48409477 to 48409525 48 - TSS region transcription start site region 148535
Tssr148536 17 48409588 to 48409599 11 - TSS region transcription start site region 148536
Tssr148537 17 48409729 to 48409766 37 - TSS region transcription start site region 148537
Tssr145111 17 48409980 to 48410104 124 + TSS region transcription start site region 145111
Oard1 17 48410014 to 48417266 7252 + protein coding gene O-acyl-ADP-ribose deacylase 1
Tssr145112 17 48410148 to 48410162 14 + TSS region transcription start site region 145112
Tssr145113 17 48410182 to 48410202 20 + TSS region transcription start site region 145113
Tssr145114 17 48410206 to 48410262 56 + TSS region transcription start site region 145114
Tssr145115 17 48410269 to 48410288 19 + TSS region transcription start site region 145115
Tssr145116 17 48410477 to 48410490 13 + TSS region transcription start site region 145116
Tssr145117 17 48411787 to 48411792 5 + TSS region transcription start site region 145117
Gm49893 17 48417280 to 48421634 4354 + antisense lncRNA gene predicted gene, 49893
Tssr148538 17 48418176 to 48418179 3 - TSS region transcription start site region 148538
Apobec2 17 48419231 to 48432728 13497 - protein coding gene apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
Gm30283 17 48423462 to 48425554 2092 + lncRNA gene predicted gene, 30283
Tssr148539 17 48432608 to 48432627 19 - TSS region transcription start site region 148539
Tssr148540 17 48432723 to 48432741 18 - TSS region transcription start site region 148540
Tssr148541 17 48432846 to 48432854 8 - TSS region transcription start site region 148541
Cpgi9292 17 48433084 to 48433291 207 CpG island CpG island 9292