MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:48040718-48150996

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi9287	17	48041932 to 48042311	379		CpG island	CpG island 9287
Gm20596	17	48055995 to 48056147	152	-	pseudogene	predicted gene, 20596
A730006G06Rik	17	48064789 to 48090378	25589	-	antisense lncRNA gene	RIKEN cDNA A730006G06 gene
Tssr145063	17	48065301 to 48065307	6	+	TSS region	transcription start site region 145063
Gm30068	17	48067365 to 48086033	18668	+	lncRNA gene	predicted gene, 30068
1700067P10Rik	17	48089632 to 48090920	1288	+	lncRNA gene	RIKEN cDNA 1700067P10 gene
Tssr145064	17	48089634 to 48089659	25	+	TSS region	transcription start site region 145064
Tssr145065	17	48089660 to 48089686	26	+	TSS region	transcription start site region 145065
Gm49946	17	48092779 to 48095632	2853	+	lincRNA gene	predicted gene, 49946
Cpgi9288	17	48095718 to 48095996	278		CpG island	CpG island 9288
Cpgi9289	17	48096349 to 48098225	1876		CpG island	CpG island 9289
Cpgi9290	17	48098590 to 48098864	274		CpG island	CpG island 9290
9830107B12Rik	17	48125605 to 48146268	20663	-	protein coding gene	RIKEN cDNA 9830107B12 gene
Gm49947	17	48141724 to 48141903	179	-	pseudogene	predicted gene, 49947
Tssr148514	17	48146198 to 48146209	11	-	TSS region	transcription start site region 148514
Tssr148515	17	48146223 to 48146232	9	-	TSS region	transcription start site region 148515
Tssr148516	17	48146234 to 48146294	60	-	TSS region	transcription start site region 148516
Tssr148517	17	48146306 to 48146311	5	-	TSS region	transcription start site region 148517
Tssr145066	17	48146379 to 48146387	8	+	TSS region	transcription start site region 145066