Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:47913379-48093572

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxp4 17 47867133 to 47924643 57510 - protein coding gene forkhead box P4
Tssr148506 17 47914207 to 47914211 4 - TSS region transcription start site region 148506
Cpgi9280 17 47922245 to 47922773 528 CpG island CpG island 9280
Gm15556 17 47922378 to 47923429 1051 + antisense lncRNA gene predicted gene 15556
Cpgi9281 17 47923036 to 47923416 380 CpG island CpG island 9281
Cpgi9282 17 47923766 to 47925505 1739 CpG island CpG island 9282
Tssr148507 17 47924432 to 47924450 18 - TSS region transcription start site region 148507
Tssr148508 17 47924460 to 47924482 22 - TSS region transcription start site region 148508
Tssr148509 17 47924635 to 47924652 17 - TSS region transcription start site region 148509
Tssr148510 17 47924656 to 47924680 24 - TSS region transcription start site region 148510
Tssr148511 17 47924682 to 47924699 17 - TSS region transcription start site region 148511
Tssr148512 17 47924743 to 47924774 31 - TSS region transcription start site region 148512
Gm38637 17 47924770 to 47946470 21700 + lncRNA gene predicted gene, 38637
Gm46601 17 47925124 to 47928253 3129 - lncRNA gene predicted gene, 46601
Gm5228 17 47936090 to 47936446 356 + pseudogene predicted gene 5228
Tssr5150 17 47938251 to 47938252 1 - TSS region transcription start site region 5150
Gm29938 17 47950119 to 47977285 27166 - lncRNA gene predicted gene, 29938
Cpgi9283 17 47973421 to 47975009 1588 CpG island CpG island 9283
Cpgi9284 17 47975208 to 47975696 488 CpG island CpG island 9284
Cpgi9285 17 47976233 to 47976397 164 CpG island CpG island 9285
Gm41591 17 47985325 to 47990358 5033 - lncRNA gene predicted gene, 41591
Gm14871 17 48003379 to 48003572 193 - pseudogene predicted gene 14871
Cpgi9286 17 48031309 to 48032054 745 CpG island CpG island 9286
1700122O11Rik 17 48036745 to 48038293 1548 - protein coding gene RIKEN cDNA 1700122O11 gene
Tssr148513 17 48038286 to 48038306 20 - TSS region transcription start site region 148513
Cpgi9287 17 48041932 to 48042311 379 CpG island CpG island 9287
Gm20596 17 48055995 to 48056147 152 - pseudogene predicted gene, 20596
A730006G06Rik 17 48064789 to 48090378 25589 - antisense lncRNA gene RIKEN cDNA A730006G06 gene
Tssr145063 17 48065301 to 48065307 6 + TSS region transcription start site region 145063
Gm30068 17 48067365 to 48086033 18668 + lncRNA gene predicted gene, 30068
1700067P10Rik 17 48089632 to 48090920 1288 + lncRNA gene RIKEN cDNA 1700067P10 gene
Tssr145064 17 48089634 to 48089659 25 + TSS region transcription start site region 145064
Tssr145065 17 48089660 to 48089686 26 + TSS region transcription start site region 145065
Gm49946 17 48092779 to 48095632 2853 + lincRNA gene predicted gene, 49946