Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:47663028-47713101

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20517 17 47611589 to 47683861 72272 + protein coding gene predicted gene 20517
Usp49 17 47630690 to 47684067 53377 + protein coding gene ubiquitin specific peptidase 49
Tssr144995 17 47668759 to 47668792 33 + TSS region transcription start site region 144995
Tssr148451 17 47670689 to 47670701 12 - TSS region transcription start site region 148451
Cpgi9267 17 47672055 to 47673301 1246 CpG island CpG island 9267
Tssr144996 17 47672668 to 47672680 12 + TSS region transcription start site region 144996
Tomm6 17 47686646 to 47688386 1740 - protein coding gene translocase of outer mitochondrial membrane 6
Gm21981 17 47686739 to 47694455 7716 - protein coding gene predicted gene 21981
Tssr148452 17 47687006 to 47687022 16 - TSS region transcription start site region 148452
Cpgi9268 17 47687486 to 47689511 2025 CpG island CpG island 9268
Tomm6os 17 47687610 to 47691083 3473 + antisense lncRNA gene translocase of outer mitochondrial membrane 6, opposite strand
Tssr5146 17 47687994 to 47688001 7 - TSS region transcription start site region 5146
Tssr148453 17 47688028 to 47688101 73 - TSS region transcription start site region 148453
Prickle4 17 47688517 to 47694736 6219 - protein coding gene prickle planar cell polarity protein 4
Tssr148454 17 47688880 to 47688925 45 - TSS region transcription start site region 148454
Tssr144997 17 47688959 to 47688970 11 + TSS region transcription start site region 144997
Tssr144998 17 47688992 to 47689007 15 + TSS region transcription start site region 144998
Frs3 17 47689030 to 47704286 15256 + protein coding gene fibroblast growth factor receptor substrate 3
Tssr148455 17 47690892 to 47690897 5 - TSS region transcription start site region 148455
Cpgi9269 17 47694488 to 47695712 1224 CpG island CpG island 9269
Tssr148456 17 47694733 to 47694755 22 - TSS region transcription start site region 148456
Tssr144999 17 47695171 to 47695204 33 + TSS region transcription start site region 144999
Frs3os 17 47699971 to 47701996 2025 - antisense lncRNA gene fibroblast growth factor receptor substrate 3, opposite strand
Tssr148457 17 47701973 to 47702008 35 - TSS region transcription start site region 148457
Tssr145000 17 47702895 to 47702908 13 + TSS region transcription start site region 145000
Tssr145001 17 47703169 to 47703182 13 + TSS region transcription start site region 145001
Tssr145002 17 47703206 to 47703247 41 + TSS region transcription start site region 145002
Gm46579 17 47711614 to 47712530 916 + lncRNA gene predicted gene, 46579