MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:47648759-47688792

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm20517	17	47611589 to 47683861	72272	+	protein coding gene	predicted gene 20517
Usp49	17	47630690 to 47684067	53377	+	protein coding gene	ubiquitin specific peptidase 49
Tssr144992	17	47655807 to 47655809	2	+	TSS region	transcription start site region 144992
Tssr144993	17	47658009 to 47658014	5	+	TSS region	transcription start site region 144993
Tssr144994	17	47662988 to 47662991	3	+	TSS region	transcription start site region 144994
Tssr144995	17	47668759 to 47668792	33	+	TSS region	transcription start site region 144995
Tssr148451	17	47670689 to 47670701	12	-	TSS region	transcription start site region 148451
Cpgi9267	17	47672055 to 47673301	1246		CpG island	CpG island 9267
Tssr144996	17	47672668 to 47672680	12	+	TSS region	transcription start site region 144996
Tomm6	17	47686646 to 47688386	1740	-	protein coding gene	translocase of outer mitochondrial membrane 6
Gm21981	17	47686739 to 47694455	7716	-	protein coding gene	predicted gene 21981
Tssr148452	17	47687006 to 47687022	16	-	TSS region	transcription start site region 148452
Cpgi9268	17	47687486 to 47689511	2025		CpG island	CpG island 9268
Tomm6os	17	47687610 to 47691083	3473	+	antisense lncRNA gene	translocase of outer mitochondrial membrane 6, opposite strand
Tssr5146	17	47687994 to 47688001	7	-	TSS region	transcription start site region 5146
Tssr148453	17	47688028 to 47688101	73	-	TSS region	transcription start site region 148453
Prickle4	17	47688517 to 47694736	6219	-	protein coding gene	prickle planar cell polarity protein 4