Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:47610689-47730701

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mrdq1 17 30768929 to 47728778 16959849 QTL modifier of retinal degeneration QTL 1
repro17 17 31842678 to 47722705 15880027 heritable phenotypic marker reproductive mutant 17, JAX Reproductive Mutagenesis Program
Bysl 17 47599331 to 47611492 12161 - protein coding gene bystin-like
Cpgi9265 17 47610800 to 47611830 1030 CpG island CpG island 9265
Tssr148446 17 47611174 to 47611178 4 - TSS region transcription start site region 148446
Tssr148447 17 47611211 to 47611244 33 - TSS region transcription start site region 148447
Tssr5145 17 47611246 to 47611251 5 - TSS region transcription start site region 5145
Tssr148448 17 47611423 to 47611434 11 - TSS region transcription start site region 148448
Tssr148449 17 47611449 to 47611544 95 - TSS region transcription start site region 148449
Tssr144986 17 47611557 to 47611568 11 + TSS region transcription start site region 144986
Tssr144987 17 47611570 to 47611619 49 + TSS region transcription start site region 144987
Gm20517 17 47611589 to 47683861 72272 + protein coding gene predicted gene 20517
Med20 17 47611596 to 47624418 12822 + protein coding gene mediator complex subunit 20
Tssr144988 17 47611623 to 47611636 13 + TSS region transcription start site region 144988
Kpna2-ps 17 47620771 to 47622339 1568 - pseudogene Kpna2 retrotransposed pseudogene
Cpgi9266 17 47629019 to 47630625 1606 CpG island CpG island 9266
Tssr148450 17 47629110 to 47629113 3 - TSS region transcription start site region 148450
Tssr144989 17 47629786 to 47629799 13 + TSS region transcription start site region 144989
Tssr144990 17 47629890 to 47629968 78 + TSS region transcription start site region 144990
Tssr144991 17 47630520 to 47630523 3 + TSS region transcription start site region 144991
Usp49 17 47630690 to 47684067 53377 + protein coding gene ubiquitin specific peptidase 49
Tssr144992 17 47655807 to 47655809 2 + TSS region transcription start site region 144992
Tssr144993 17 47658009 to 47658014 5 + TSS region transcription start site region 144993
Tssr144994 17 47662988 to 47662991 3 + TSS region transcription start site region 144994
Tssr144995 17 47668759 to 47668792 33 + TSS region transcription start site region 144995
Tssr148451 17 47670689 to 47670701 12 - TSS region transcription start site region 148451
Cpgi9267 17 47672055 to 47673301 1246 CpG island CpG island 9267
Tssr144996 17 47672668 to 47672680 12 + TSS region transcription start site region 144996
Tomm6 17 47686646 to 47688386 1740 - protein coding gene translocase of outer mitochondrial membrane 6
Gm21981 17 47686739 to 47694455 7716 - protein coding gene predicted gene 21981
Tssr148452 17 47687006 to 47687022 16 - TSS region transcription start site region 148452
Cpgi9268 17 47687486 to 47689511 2025 CpG island CpG island 9268
Tomm6os 17 47687610 to 47691083 3473 + antisense lncRNA gene translocase of outer mitochondrial membrane 6, opposite strand
Tssr5146 17 47687994 to 47688001 7 - TSS region transcription start site region 5146
Tssr148453 17 47688028 to 47688101 73 - TSS region transcription start site region 148453
Prickle4 17 47688517 to 47694736 6219 - protein coding gene prickle planar cell polarity protein 4
Tssr148454 17 47688880 to 47688925 45 - TSS region transcription start site region 148454
Tssr144997 17 47688959 to 47688970 11 + TSS region transcription start site region 144997
Tssr144998 17 47688992 to 47689007 15 + TSS region transcription start site region 144998
Frs3 17 47689030 to 47704286 15256 + protein coding gene fibroblast growth factor receptor substrate 3
Tssr148455 17 47690892 to 47690897 5 - TSS region transcription start site region 148455
Cpgi9269 17 47694488 to 47695712 1224 CpG island CpG island 9269
Tssr148456 17 47694733 to 47694755 22 - TSS region transcription start site region 148456
Tssr144999 17 47695171 to 47695204 33 + TSS region transcription start site region 144999
Frs3os 17 47699971 to 47701996 2025 - antisense lncRNA gene fibroblast growth factor receptor substrate 3, opposite strand
Tssr148457 17 47701973 to 47702008 35 - TSS region transcription start site region 148457
Tssr145000 17 47702895 to 47702908 13 + TSS region transcription start site region 145000
Tssr145001 17 47703169 to 47703182 13 + TSS region transcription start site region 145001
Tssr145002 17 47703206 to 47703247 41 + TSS region transcription start site region 145002
Gm46579 17 47711614 to 47712530 916 + lncRNA gene predicted gene, 46579
Tssr148458 17 47713340 to 47713351 11 - TSS region transcription start site region 148458
Plgr1 17 47722575 to 47722705 130 QTL plague resistance locus 1
D17Mit66 17 47722575 to 47722705 130 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 66
D17Dcr12 17 47722588 to 47722704 116 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 12
Tssr145003 17 47726834 to 47726848 14 + TSS region transcription start site region 145003
Pgc 17 47726842 to 47734478 7636 + protein coding gene progastricsin (pepsinogen C)
D17Mit201 17 47727211 to 47727335 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 201
Tssr145004 17 47728732 to 47728742 10 + TSS region transcription start site region 145004
Tssr5147 17 47728750 to 47728751 1 + TSS region transcription start site region 5147
Tssr145005 17 47728760 to 47728763 3 + TSS region transcription start site region 145005
Tssr145006 17 47728769 to 47728792 23 + TSS region transcription start site region 145006
Tssr145007 17 47728796 to 47728824 28 + TSS region transcription start site region 145007
Tssr148459 17 47728796 to 47728801 5 - TSS region transcription start site region 148459
Tssr148460 17 47728817 to 47728853 36 - TSS region transcription start site region 148460
Tssr145008 17 47728830 to 47728845 15 + TSS region transcription start site region 145008
Tssr145009 17 47728847 to 47728873 26 + TSS region transcription start site region 145009
Tssr148461 17 47728856 to 47728865 9 - TSS region transcription start site region 148461
Tssr148462 17 47728875 to 47728908 33 - TSS region transcription start site region 148462
Tssr145010 17 47729250 to 47729255 5 + TSS region transcription start site region 145010
Tssr145011 17 47729263 to 47729274 11 + TSS region transcription start site region 145011
Tssr145012 17 47729275 to 47729291 16 + TSS region transcription start site region 145012
Tssr148463 17 47729278 to 47729281 3 - TSS region transcription start site region 148463
Tssr145013 17 47729294 to 47729343 49 + TSS region transcription start site region 145013
Tssr5148 17 47729310 to 47729313 3 - TSS region transcription start site region 5148
Tssr148464 17 47729356 to 47729366 10 - TSS region transcription start site region 148464
Tssr145014 17 47730080 to 47730137 57 + TSS region transcription start site region 145014
Tssr148465 17 47730121 to 47730127 6 - TSS region transcription start site region 148465
Tssr148466 17 47730134 to 47730161 27 - TSS region transcription start site region 148466
Tssr145015 17 47730142 to 47730152 10 + TSS region transcription start site region 145015
Tssr145016 17 47730153 to 47730156 3 + TSS region transcription start site region 145016
Tssr145017 17 47730598 to 47730605 7 + TSS region transcription start site region 145017
Tssr145018 17 47730610 to 47730611 1 + TSS region transcription start site region 145018
Tssr148467 17 47730629 to 47730632 3 - TSS region transcription start site region 148467
Tssr145019 17 47730641 to 47730642 1 + TSS region transcription start site region 145019
Tssr148468 17 47730660 to 47730669 9 - TSS region transcription start site region 148468
Tssr145020 17 47730662 to 47730671 9 + TSS region transcription start site region 145020
Tssr145021 17 47730688 to 47730701 13 + TSS region transcription start site region 145021