Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:47461996-47542390

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
AI661453 17 47436639 to 47470638 33999 + protein coding gene expressed sequence AI661453
Tssr148439 17 47465829 to 47465841 12 - TSS region transcription start site region 148439
Tssr144916 17 47468337 to 47468378 41 + TSS region transcription start site region 144916
Cpgi9260 17 47468370 to 47468997 627 CpG island CpG island 9260
Taf8 17 47483414 to 47502321 18907 - protein coding gene TATA-box binding protein associated factor 8
Tssr148440 17 47501899 to 47501946 47 - TSS region transcription start site region 148440
Cpgi9261 17 47501996 to 47502390 394 CpG island CpG island 9261
Tssr148441 17 47502276 to 47502296 20 - TSS region transcription start site region 148441
Tssr144917 17 47504841 to 47504844 3 + TSS region transcription start site region 144917
Cpgi9262 17 47504876 to 47505345 469 CpG island CpG island 9262
Tssr144918 17 47504949 to 47504960 11 + TSS region transcription start site region 144918
Tssr144919 17 47505043 to 47505066 23 + TSS region transcription start site region 144919
Ccnd3 17 47505051 to 47599689 94638 + protein coding gene cyclin D3
Tssr144920 17 47505073 to 47505084 11 + TSS region transcription start site region 144920
Tssr144921 17 47505085 to 47505105 20 + TSS region transcription start site region 144921
Tssr144922 17 47505117 to 47505132 15 + TSS region transcription start site region 144922
Tssr144923 17 47505158 to 47505164 6 + TSS region transcription start site region 144923
Tssr144924 17 47505174 to 47505182 8 + TSS region transcription start site region 144924
Tssr144925 17 47505191 to 47505205 14 + TSS region transcription start site region 144925
Tssr144926 17 47505211 to 47505228 17 + TSS region transcription start site region 144926
Tssr148442 17 47507986 to 47508006 20 - TSS region transcription start site region 148442
Tssr144927 17 47508287 to 47508306 19 + TSS region transcription start site region 144927
Tssr144928 17 47509193 to 47509205 12 + TSS region transcription start site region 144928
Tssr144929 17 47509342 to 47509364 22 + TSS region transcription start site region 144929
Tssr144930 17 47509420 to 47509440 20 + TSS region transcription start site region 144930
Tssr144931 17 47509448 to 47509457 9 + TSS region transcription start site region 144931
Tssr5140 17 47509476 to 47509491 15 + TSS region transcription start site region 5140
Tssr148443 17 47509500 to 47509511 11 - TSS region transcription start site region 148443
Tssr144932 17 47509517 to 47509534 17 + TSS region transcription start site region 144932
Tssr144933 17 47509563 to 47509583 20 + TSS region transcription start site region 144933
Tssr144934 17 47509629 to 47509650 21 + TSS region transcription start site region 144934
Tssr144935 17 47510629 to 47510638 9 + TSS region transcription start site region 144935
Tssr144936 17 47511879 to 47511890 11 + TSS region transcription start site region 144936
Tssr144937 17 47511893 to 47511906 13 + TSS region transcription start site region 144937
Tssr144938 17 47512897 to 47512910 13 + TSS region transcription start site region 144938
Tssr5141 17 47518882 to 47518922 40 + TSS region transcription start site region 5141
Tssr5142 17 47521822 to 47521829 7 + TSS region transcription start site region 5142
Tssr144939 17 47521926 to 47521936 10 + TSS region transcription start site region 144939
Cpgi9263 17 47523280 to 47523474 194 CpG island CpG island 9263
Tssr144940 17 47527789 to 47527806 17 + TSS region transcription start site region 144940
5830436I19Rik 17 47527960 to 47532815 4855 unclassified non-coding RNA gene RIKEN cDNA 5830436I19 gene
Tssr144941 17 47527977 to 47527992 15 + TSS region transcription start site region 144941
Tssr144942 17 47529313 to 47529324 11 + TSS region transcription start site region 144942
Tssr148444 17 47535830 to 47535846 16 - TSS region transcription start site region 148444
Tssr144943 17 47538436 to 47538448 12 + TSS region transcription start site region 144943
Tssr144944 17 47538639 to 47538653 14 + TSS region transcription start site region 144944
Tssr144945 17 47538689 to 47538695 6 + TSS region transcription start site region 144945
Tssr144946 17 47540277 to 47540288 11 + TSS region transcription start site region 144946
Tssr144947 17 47540416 to 47540424 8 + TSS region transcription start site region 144947
Tssr144948 17 47540443 to 47540459 16 + TSS region transcription start site region 144948
Tssr144949 17 47540487 to 47540501 14 + TSS region transcription start site region 144949
Tssr144950 17 47540725 to 47540737 12 + TSS region transcription start site region 144950
Tssr144951 17 47540742 to 47540755 13 + TSS region transcription start site region 144951
Tssr144952 17 47540758 to 47540772 14 + TSS region transcription start site region 144952
Gm41590 17 47540824 to 47546964 6140 - lncRNA gene predicted gene, 41590