Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:47396585-47476595

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Guca1a 17 47394558 to 47400584 6026 - protein coding gene guanylate cyclase activator 1a (retina)
Tssr148423 17 47400549 to 47400571 22 - TSS region transcription start site region 148423
Tssr148424 17 47400585 to 47400599 14 - TSS region transcription start site region 148424
Tssr148425 17 47400616 to 47400619 3 - TSS region transcription start site region 148425
Cpgi9258 17 47409842 to 47410802 960 CpG island CpG island 9258
Tssr144908 17 47410247 to 47410253 6 + TSS region transcription start site region 144908
Gm5814 17 47410363 to 47410737 374 + pseudogene predicted pseudogene 5814
Tssr144909 17 47410507 to 47410549 42 + TSS region transcription start site region 144909
Tssr144910 17 47410852 to 47410884 32 + TSS region transcription start site region 144910
1700001C19Rik 17 47412734 to 47437376 24642 - protein coding gene RIKEN cDNA 1700001C19 gene
Tssr148426 17 47414667 to 47414670 3 - TSS region transcription start site region 148426
Tssr148427 17 47414685 to 47414691 6 - TSS region transcription start site region 148427
Tssr148428 17 47414705 to 47414725 20 - TSS region transcription start site region 148428
Tssr148429 17 47414729 to 47414736 7 - TSS region transcription start site region 148429
Tssr148430 17 47421852 to 47421864 12 - TSS region transcription start site region 148430
Tssr148431 17 47421873 to 47421885 12 - TSS region transcription start site region 148431
Tssr148432 17 47422539 to 47422554 15 - TSS region transcription start site region 148432
Tssr148433 17 47422579 to 47422588 9 - TSS region transcription start site region 148433
Tssr148434 17 47433264 to 47433267 3 - TSS region transcription start site region 148434
Tssr148435 17 47433408 to 47433430 22 - TSS region transcription start site region 148435
Tssr148436 17 47433432 to 47433456 24 - TSS region transcription start site region 148436
Cpgi9259 17 47436194 to 47437392 1198 CpG island CpG island 9259
Tssr144911 17 47436585 to 47436595 10 + TSS region transcription start site region 144911
Tssr144912 17 47436601 to 47436608 7 + TSS region transcription start site region 144912
Tssr144913 17 47436616 to 47436639 23 + TSS region transcription start site region 144913
AI661453 17 47436639 to 47470638 33999 + protein coding gene expressed sequence AI661453
Tssr144914 17 47436647 to 47436658 11 + TSS region transcription start site region 144914
Tssr144915 17 47436731 to 47436743 12 + TSS region transcription start site region 144915
Tssr148437 17 47437220 to 47437247 27 - TSS region transcription start site region 148437
Tssr148438 17 47437365 to 47437391 26 - TSS region transcription start site region 148438
D17Mit250 17 47459685 to 47459809 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 250
D17Dcr10 17 47459694 to 47459817 123 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 10
Tssr148439 17 47465829 to 47465841 12 - TSS region transcription start site region 148439
Tssr144916 17 47468337 to 47468378 41 + TSS region transcription start site region 144916
Cpgi9260 17 47468370 to 47468997 627 CpG island CpG island 9260