Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:46666459-46756497

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rrp36 17 46667442 to 46674285 6843 - protein coding gene ribosomal RNA processing 36 homolog (S. cerevisiae)
Cpgi9238 17 46673960 to 46674560 600 CpG island CpG island 9238
Tssr148359 17 46674263 to 46674274 11 - TSS region transcription start site region 148359
Tssr148360 17 46674284 to 46674289 5 - TSS region transcription start site region 148360
Tssr148361 17 46674298 to 46674323 25 - TSS region transcription start site region 148361
Klhdc3 17 46674550 to 46680914 6364 - protein coding gene kelch domain containing 3
Tssr148362 17 46675137 to 46675185 48 - TSS region transcription start site region 148362
Tssr148363 17 46676747 to 46676774 27 - TSS region transcription start site region 148363
Tssr148364 17 46678560 to 46678582 22 - TSS region transcription start site region 148364
Tssr148365 17 46678609 to 46678622 13 - TSS region transcription start site region 148365
Tssr148366 17 46678627 to 46678644 17 - TSS region transcription start site region 148366
Tssr144870 17 46678769 to 46678793 24 + TSS region transcription start site region 144870
Tssr144871 17 46678800 to 46678827 27 + TSS region transcription start site region 144871
Mea1 17 46679138 to 46683126 3988 + protein coding gene male enhanced antigen 1
Tssr144872 17 46680424 to 46680478 54 + TSS region transcription start site region 144872
Cpgi9239 17 46680454 to 46681576 1122 CpG island CpG island 9239
Tssr148367 17 46680726 to 46680734 8 - TSS region transcription start site region 148367
Tssr148368 17 46680749 to 46680756 7 - TSS region transcription start site region 148368
Tssr148369 17 46680764 to 46680775 11 - TSS region transcription start site region 148369
Tssr5136 17 46680776 to 46680781 5 - TSS region transcription start site region 5136
Tssr148370 17 46680786 to 46680834 48 - TSS region transcription start site region 148370
Tssr148371 17 46680847 to 46680859 12 - TSS region transcription start site region 148371
Tssr148372 17 46680870 to 46680933 63 - TSS region transcription start site region 148372
Tssr5137 17 46680935 to 46680944 9 - TSS region transcription start site region 5137
Tssr144873 17 46680980 to 46681011 31 + TSS region transcription start site region 144873
Tssr144874 17 46681038 to 46681184 146 + TSS region transcription start site region 144874
Tssr148373 17 46681901 to 46681905 4 - TSS region transcription start site region 148373
Tssr148374 17 46681913 to 46681924 11 - TSS region transcription start site region 148374
Tssr144875 17 46681976 to 46682034 58 + TSS region transcription start site region 144875
Tssr144876 17 46682035 to 46682040 5 + TSS region transcription start site region 144876
Ppp2r5d 17 46682991 to 46705020 22029 - protein coding gene protein phosphatase 2, regulatory subunit B', delta
Cpgi9240 17 46704558 to 46705371 813 CpG island CpG island 9240
Tssr148375 17 46704902 to 46705000 98 - TSS region transcription start site region 148375
Tssr148376 17 46705002 to 46705013 11 - TSS region transcription start site region 148376
Cpgi9241 17 46711178 to 46712371 1193 CpG island CpG island 9241
Tssr144877 17 46711459 to 46711497 38 + TSS region transcription start site region 144877
Pex6 17 46711463 to 46725541 14078 + protein coding gene peroxisomal biogenesis factor 6
Gnmt 17 46725664 to 46729168 3504 - protein coding gene glycine N-methyltransferase
Tssr148377 17 46726314 to 46726323 9 - TSS region transcription start site region 148377
Tssr148378 17 46726327 to 46726342 15 - TSS region transcription start site region 148378
Tssr148379 17 46726344 to 46726355 11 - TSS region transcription start site region 148379
Tssr148380 17 46726709 to 46726718 9 - TSS region transcription start site region 148380
Tssr148381 17 46727356 to 46727372 16 - TSS region transcription start site region 148381
Cpgi9242 17 46728703 to 46729307 604 CpG island CpG island 9242
Tssr148382 17 46729158 to 46729172 14 - TSS region transcription start site region 148382
Cpgi9243 17 46729748 to 46729973 225 CpG island CpG island 9243
D17Mit116 17 46733378 to 46733525 147 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 116
Cnpy3 17 46735705 to 46752214 16509 - protein coding gene canopy FGF signaling regulator 3
Tssr148383 17 46736155 to 46736169 14 - TSS region transcription start site region 148383
Cpgi9244 17 46751659 to 46752541 882 CpG island CpG island 9244
Tssr144878 17 46751961 to 46751982 21 + TSS region transcription start site region 144878
Tssr148384 17 46752057 to 46752058 1 - TSS region transcription start site region 148384
Tssr148385 17 46752074 to 46752090 16 - TSS region transcription start site region 148385
Tssr148386 17 46752113 to 46752153 40 - TSS region transcription start site region 148386
Tssr148387 17 46752154 to 46752167 13 - TSS region transcription start site region 148387
Tssr148388 17 46752170 to 46752231 61 - TSS region transcription start site region 148388
Tssr144879 17 46752434 to 46752461 27 + TSS region transcription start site region 144879
Ptcra 17 46755663 to 46763712 8049 - protein coding gene pre T cell antigen receptor alpha