Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:46523987-46724011

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cul9 17 46500609 to 46546388 45779 - protein coding gene cullin 9
Cpgi9232 17 46545957 to 46546596 639 CpG island CpG island 9232
Tssr148330 17 46546275 to 46546333 58 - TSS region transcription start site region 148330
Srf 17 46548329 to 46556175 7846 - protein coding gene serum response factor
Tssr148331 17 46552840 to 46552859 19 - TSS region transcription start site region 148331
Tssr148332 17 46552862 to 46552868 6 - TSS region transcription start site region 148332
Tssr148333 17 46552874 to 46552891 17 - TSS region transcription start site region 148333
Mir6976 17 46553827 to 46553889 62 - miRNA gene microRNA 6976
Cpgi9233 17 46554727 to 46556650 1923 CpG island CpG island 9233
Tssr5134 17 46555198 to 46555227 29 + TSS region transcription start site region 5134
Tssr144859 17 46555242 to 46555256 14 + TSS region transcription start site region 144859
Tssr148334 17 46555460 to 46555484 24 - TSS region transcription start site region 148334
Tssr148335 17 46556021 to 46556028 7 - TSS region transcription start site region 148335
Tssr148336 17 46556037 to 46556044 7 - TSS region transcription start site region 148336
Tssr148337 17 46556104 to 46556115 11 - TSS region transcription start site region 148337
Tssr148338 17 46556129 to 46556148 19 - TSS region transcription start site region 148338
Tssr148339 17 46556158 to 46556188 30 - TSS region transcription start site region 148339
Tssr148340 17 46556204 to 46556220 16 - TSS region transcription start site region 148340
Tssr144860 17 46556421 to 46556429 8 + TSS region transcription start site region 144860
Ptk7 17 46564471 to 46629504 65033 - protein coding gene PTK7 protein tyrosine kinase 7
Tssr5135 17 46572107 to 46572110 3 - TSS region transcription start site region 5135
Tssr148341 17 46587082 to 46587088 6 - TSS region transcription start site region 148341
Tssr148342 17 46590467 to 46590484 17 - TSS region transcription start site region 148342
Tssr148343 17 46590486 to 46590510 24 - TSS region transcription start site region 148343
Tssr148344 17 46599755 to 46599761 6 - TSS region transcription start site region 148344
Tssr144861 17 46623987 to 46624011 24 + TSS region transcription start site region 144861
Cpgi9234 17 46628527 to 46630089 1562 CpG island CpG island 9234
Tssr148345 17 46629357 to 46629378 21 - TSS region transcription start site region 148345
Tssr148346 17 46629404 to 46629419 15 - TSS region transcription start site region 148346
Tssr148347 17 46629420 to 46629500 80 - TSS region transcription start site region 148347
Tssr148348 17 46629731 to 46629742 11 - TSS region transcription start site region 148348
Tssr148349 17 46630033 to 46630082 49 - TSS region transcription start site region 148349
Klc4 17 46630624 to 46646022 15398 - protein coding gene kinesin light chain 4
Tssr148350 17 46637244 to 46637249 5 - TSS region transcription start site region 148350
Tssr148351 17 46640034 to 46640045 11 - TSS region transcription start site region 148351
Tssr148352 17 46640060 to 46640072 12 - TSS region transcription start site region 148352
Tssr148353 17 46640082 to 46640118 36 - TSS region transcription start site region 148353
Tssr148354 17 46640123 to 46640134 11 - TSS region transcription start site region 148354
Tssr148355 17 46645128 to 46645159 31 - TSS region transcription start site region 148355
Cpgi9235 17 46645444 to 46646614 1170 CpG island CpG island 9235
Tssr148356 17 46645763 to 46645786 23 - TSS region transcription start site region 148356
Tssr148357 17 46645996 to 46646035 39 - TSS region transcription start site region 148357
Tssr148358 17 46646037 to 46646085 48 - TSS region transcription start site region 148358
Tssr144862 17 46646225 to 46646272 47 + TSS region transcription start site region 144862
Mrpl2 17 46646229 to 46650139 3910 + protein coding gene mitochondrial ribosomal protein L2
Tssr144863 17 46646288 to 46646296 8 + TSS region transcription start site region 144863
Cpgi9236 17 46649852 to 46651247 1395 CpG island CpG island 9236
Tssr144864 17 46650328 to 46650340 12 + TSS region transcription start site region 144864
Cul7 17 46650338 to 46664364 14026 + protein coding gene cullin 7
Tssr144865 17 46650550 to 46650568 18 + TSS region transcription start site region 144865
Tssr144866 17 46650575 to 46650589 14 + TSS region transcription start site region 144866
Tssr144867 17 46650608 to 46650634 26 + TSS region transcription start site region 144867
Tssr144868 17 46650642 to 46650661 19 + TSS region transcription start site region 144868
Tssr144869 17 46655515 to 46655520 5 + TSS region transcription start site region 144869
Cpgi9237 17 46661775 to 46662213 438 CpG island CpG island 9237
Rrp36 17 46667442 to 46674285 6843 - protein coding gene ribosomal RNA processing 36 homolog (S. cerevisiae)
Cpgi9238 17 46673960 to 46674560 600 CpG island CpG island 9238
Tssr148359 17 46674263 to 46674274 11 - TSS region transcription start site region 148359
Tssr148360 17 46674284 to 46674289 5 - TSS region transcription start site region 148360
Tssr148361 17 46674298 to 46674323 25 - TSS region transcription start site region 148361
Klhdc3 17 46674550 to 46680914 6364 - protein coding gene kelch domain containing 3
Tssr148362 17 46675137 to 46675185 48 - TSS region transcription start site region 148362
Tssr148363 17 46676747 to 46676774 27 - TSS region transcription start site region 148363
Tssr148364 17 46678560 to 46678582 22 - TSS region transcription start site region 148364
Tssr148365 17 46678609 to 46678622 13 - TSS region transcription start site region 148365
Tssr148366 17 46678627 to 46678644 17 - TSS region transcription start site region 148366
Tssr144870 17 46678769 to 46678793 24 + TSS region transcription start site region 144870
Tssr144871 17 46678800 to 46678827 27 + TSS region transcription start site region 144871
Mea1 17 46679138 to 46683126 3988 + protein coding gene male enhanced antigen 1
Tssr144872 17 46680424 to 46680478 54 + TSS region transcription start site region 144872
Cpgi9239 17 46680454 to 46681576 1122 CpG island CpG island 9239
Tssr148367 17 46680726 to 46680734 8 - TSS region transcription start site region 148367
Tssr148368 17 46680749 to 46680756 7 - TSS region transcription start site region 148368
Tssr148369 17 46680764 to 46680775 11 - TSS region transcription start site region 148369
Tssr5136 17 46680776 to 46680781 5 - TSS region transcription start site region 5136
Tssr148370 17 46680786 to 46680834 48 - TSS region transcription start site region 148370
Tssr148371 17 46680847 to 46680859 12 - TSS region transcription start site region 148371
Tssr148372 17 46680870 to 46680933 63 - TSS region transcription start site region 148372
Tssr5137 17 46680935 to 46680944 9 - TSS region transcription start site region 5137
Tssr144873 17 46680980 to 46681011 31 + TSS region transcription start site region 144873
Tssr144874 17 46681038 to 46681184 146 + TSS region transcription start site region 144874
Tssr148373 17 46681901 to 46681905 4 - TSS region transcription start site region 148373
Tssr148374 17 46681913 to 46681924 11 - TSS region transcription start site region 148374
Tssr144875 17 46681976 to 46682034 58 + TSS region transcription start site region 144875
Tssr144876 17 46682035 to 46682040 5 + TSS region transcription start site region 144876
Ppp2r5d 17 46682991 to 46705020 22029 - protein coding gene protein phosphatase 2, regulatory subunit B', delta
Cpgi9240 17 46704558 to 46705371 813 CpG island CpG island 9240
Tssr148375 17 46704902 to 46705000 98 - TSS region transcription start site region 148375
Tssr148376 17 46705002 to 46705013 11 - TSS region transcription start site region 148376
Cpgi9241 17 46711178 to 46712371 1193 CpG island CpG island 9241
Tssr144877 17 46711459 to 46711497 38 + TSS region transcription start site region 144877
Pex6 17 46711463 to 46725541 14078 + protein coding gene peroxisomal biogenesis factor 6