Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:46416583-46577264

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp318 17 46383731 to 46420920 37189 + protein coding gene zinc finger protein 318
Tssr144853 17 46428917 to 46428929 12 + TSS region transcription start site region 144853
Crip3 17 46428926 to 46431776 2850 + protein coding gene cysteine-rich protein 3
Tssr144854 17 46428930 to 46428949 19 + TSS region transcription start site region 144854
Slc22a7 17 46432183 to 46438457 6274 - protein coding gene solute carrier family 22 (organic anion transporter), member 7
Tssr148321 17 46433701 to 46433715 14 - TSS region transcription start site region 148321
Tssr144855 17 46433831 to 46433839 8 + TSS region transcription start site region 144855
Cpgi9224 17 46433849 to 46434062 213 CpG island CpG island 9224
Gm36541 17 46437355 to 46437990 635 + lncRNA gene predicted gene, 36541
Tssr148322 17 46438415 to 46438424 9 - TSS region transcription start site region 148322
Tssr148323 17 46438445 to 46438470 25 - TSS region transcription start site region 148323
Tssr148324 17 46438471 to 46438481 10 - TSS region transcription start site region 148324
Gm5093 17 46439578 to 46440097 519 - protein coding gene predicted gene 5093
Tssr148325 17 46440116 to 46440125 9 - TSS region transcription start site region 148325
Tssr148326 17 46442212 to 46442214 2 - TSS region transcription start site region 148326
Ttbk1 17 46442448 to 46487675 45227 - protein coding gene tau tubulin kinase 1
Cpgi9225 17 46444888 to 46445533 645 CpG island CpG island 9225
Cpgi9226 17 46454121 to 46454606 485 CpG island CpG island 9226
Cpgi9227 17 46455199 to 46456046 847 CpG island CpG island 9227
Cpgi9228 17 46460435 to 46461344 909 CpG island CpG island 9228
Gm26904 17 46471501 to 46825221 353720 + lincRNA gene predicted gene, 26904
Gm47119 17 46476507 to 46477659 1152 + antisense lncRNA gene predicted gene, 47119
Cpgi9229 17 46483659 to 46484277 618 CpG island CpG island 9229
Cpgi9230 17 46486636 to 46488077 1441 CpG island CpG island 9230
Tssr148327 17 46487641 to 46487682 41 - TSS region transcription start site region 148327
Cpgi9231 17 46496583 to 46497264 681 CpG island CpG island 9231
Tssr144856 17 46496753 to 46496809 56 + TSS region transcription start site region 144856
Dnph1 17 46496789 to 46499618 2829 + protein coding gene 2'-deoxynucleoside 5'-phosphate N-hydrolase 1
Cul9 17 46500609 to 46546388 45779 - protein coding gene cullin 9
Tssr148328 17 46520649 to 46520665 16 - TSS region transcription start site region 148328
Tssr148329 17 46520670 to 46520719 49 - TSS region transcription start site region 148329
Tssr144857 17 46520758 to 46520782 24 + TSS region transcription start site region 144857
Tssr144858 17 46520786 to 46520807 21 + TSS region transcription start site region 144858
Cpgi9232 17 46545957 to 46546596 639 CpG island CpG island 9232
Tssr148330 17 46546275 to 46546333 58 - TSS region transcription start site region 148330
Srf 17 46548329 to 46556175 7846 - protein coding gene serum response factor
Tssr148331 17 46552840 to 46552859 19 - TSS region transcription start site region 148331
Tssr148332 17 46552862 to 46552868 6 - TSS region transcription start site region 148332
Tssr148333 17 46552874 to 46552891 17 - TSS region transcription start site region 148333
Mir6976 17 46553827 to 46553889 62 - miRNA gene microRNA 6976
Cpgi9233 17 46554727 to 46556650 1923 CpG island CpG island 9233
Tssr5134 17 46555198 to 46555227 29 + TSS region transcription start site region 5134
Tssr144859 17 46555242 to 46555256 14 + TSS region transcription start site region 144859
Tssr148334 17 46555460 to 46555484 24 - TSS region transcription start site region 148334
Tssr148335 17 46556021 to 46556028 7 - TSS region transcription start site region 148335
Tssr148336 17 46556037 to 46556044 7 - TSS region transcription start site region 148336
Tssr148337 17 46556104 to 46556115 11 - TSS region transcription start site region 148337
Tssr148338 17 46556129 to 46556148 19 - TSS region transcription start site region 148338
Tssr148339 17 46556158 to 46556188 30 - TSS region transcription start site region 148339
Tssr148340 17 46556204 to 46556220 16 - TSS region transcription start site region 148340
Tssr144860 17 46556421 to 46556429 8 + TSS region transcription start site region 144860
Ptk7 17 46564471 to 46629504 65033 - protein coding gene PTK7 protein tyrosine kinase 7
Tssr5135 17 46572107 to 46572110 3 - TSS region transcription start site region 5135