Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:46251653-46457149

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Yipf3 17 46248080 to 46252537 4457 + protein coding gene Yip1 domain family, member 3
Cpgi9220 17 46253457 to 46254940 1483 CpG island CpG island 9220
Tssr144841 17 46253917 to 46253978 61 + TSS region transcription start site region 144841
Tssr144842 17 46253981 to 46253986 5 + TSS region transcription start site region 144842
Tssr144843 17 46254017 to 46254022 5 + TSS region transcription start site region 144843
Lrrc73 17 46254165 to 46257316 3151 + protein coding gene leucine rich repeat containing 73
Tjap1 17 46257851 to 46283026 25175 - protein coding gene tight junction associated protein 1
Tssr148309 17 46264595 to 46264596 1 - TSS region transcription start site region 148309
Tssr148310 17 46264933 to 46264953 20 - TSS region transcription start site region 148310
Tssr148311 17 46270788 to 46270809 21 - TSS region transcription start site region 148311
Tssr148312 17 46270813 to 46270824 11 - TSS region transcription start site region 148312
Tssr148313 17 46270851 to 46270864 13 - TSS region transcription start site region 148313
Gm26785 17 46273479 to 46280060 6581 + lincRNA gene predicted gene, 26785
Tssr148314 17 46282482 to 46282493 11 - TSS region transcription start site region 148314
Tssr148315 17 46282648 to 46282676 28 - TSS region transcription start site region 148315
Tssr148316 17 46282991 to 46283026 35 - TSS region transcription start site region 148316
D17Mit235 17 46284264 to 46284354 90 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 235
Cpgi9221 17 46297269 to 46299104 1835 CpG island CpG island 9221
Tssr144844 17 46297406 to 46297447 41 + TSS region transcription start site region 144844
Dlk2 17 46297421 to 46303271 5850 + protein coding gene delta like non-canonical Notch ligand 2
Tssr144845 17 46297852 to 46297863 11 + TSS region transcription start site region 144845
Tssr144846 17 46297917 to 46297938 21 + TSS region transcription start site region 144846
Gm41588 17 46299018 to 46300090 1072 + lncRNA gene predicted gene, 41588
Abcc10 17 46303230 to 46328032 24802 - protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 10
Cpgi9222 17 46327570 to 46328600 1030 CpG island CpG island 9222
Tssr148317 17 46327949 to 46327987 38 - TSS region transcription start site region 148317
Tssr148318 17 46327990 to 46328001 11 - TSS region transcription start site region 148318
Tssr144847 17 46328083 to 46328136 53 + TSS region transcription start site region 144847
BC040756 17 46351653 to 46357149 5496 + lncRNA gene cDNA sequence BC040756
Cpgi9223 17 46383194 to 46384698 1504 CpG island CpG island 9223
Tssr144848 17 46383543 to 46383566 23 + TSS region transcription start site region 144848
Tssr144849 17 46383569 to 46383622 53 + TSS region transcription start site region 144849
Tssr144850 17 46383725 to 46383792 67 + TSS region transcription start site region 144850
Zfp318 17 46383731 to 46420920 37189 + protein coding gene zinc finger protein 318
Tssr144851 17 46383798 to 46383822 24 + TSS region transcription start site region 144851
Gm23037 17 46403875 to 46404198 323 + unclassified non-coding RNA gene predicted gene, 23037
Gm9706 17 46407004 to 46407484 480 - unclassified gene predicted gene 9706
Tssr148319 17 46407497 to 46407524 27 - TSS region transcription start site region 148319
Tssr148320 17 46407552 to 46407587 35 - TSS region transcription start site region 148320
Tssr144852 17 46410886 to 46410896 10 + TSS region transcription start site region 144852
Tssr144853 17 46428917 to 46428929 12 + TSS region transcription start site region 144853
Crip3 17 46428926 to 46431776 2850 + protein coding gene cysteine-rich protein 3
Tssr144854 17 46428930 to 46428949 19 + TSS region transcription start site region 144854
Slc22a7 17 46432183 to 46438457 6274 - protein coding gene solute carrier family 22 (organic anion transporter), member 7
Tssr148321 17 46433701 to 46433715 14 - TSS region transcription start site region 148321
Tssr144855 17 46433831 to 46433839 8 + TSS region transcription start site region 144855
Cpgi9224 17 46433849 to 46434062 213 CpG island CpG island 9224
Gm36541 17 46437355 to 46437990 635 + lncRNA gene predicted gene, 36541
Tssr148322 17 46438415 to 46438424 9 - TSS region transcription start site region 148322
Tssr148323 17 46438445 to 46438470 25 - TSS region transcription start site region 148323
Tssr148324 17 46438471 to 46438481 10 - TSS region transcription start site region 148324
Gm5093 17 46439578 to 46440097 519 - protein coding gene predicted gene 5093
Tssr148325 17 46440116 to 46440125 9 - TSS region transcription start site region 148325
Tssr148326 17 46442212 to 46442214 2 - TSS region transcription start site region 148326
Ttbk1 17 46442448 to 46487675 45227 - protein coding gene tau tubulin kinase 1
Cpgi9225 17 46444888 to 46445533 645 CpG island CpG island 9225
Cpgi9226 17 46454121 to 46454606 485 CpG island CpG island 9226
Cpgi9227 17 46455199 to 46456046 847 CpG island CpG island 9227