Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:46167770-46287780

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gtpbp2 17 46161032 to 46169370 8338 + protein coding gene GTP binding protein 2
Polh 17 46171355 to 46202645 31290 - protein coding gene polymerase (DNA directed), eta (RAD 30 related)
Cpgi9218 17 46202031 to 46203608 1577 CpG island CpG island 9218
Tssr148305 17 46202450 to 46202473 23 - TSS region transcription start site region 148305
Tssr148306 17 46202487 to 46202515 28 - TSS region transcription start site region 148306
Tssr148307 17 46202576 to 46202673 97 - TSS region transcription start site region 148307
Tssr144831 17 46202740 to 46202854 114 + TSS region transcription start site region 144831
Xpo5 17 46202855 to 46242299 39444 + protein coding gene exportin 5
Tssr144832 17 46202861 to 46202878 17 + TSS region transcription start site region 144832
Tssr144833 17 46227770 to 46227780 10 + TSS region transcription start site region 144833
Tssr144834 17 46227788 to 46227799 11 + TSS region transcription start site region 144834
Tssr144835 17 46227803 to 46227808 5 + TSS region transcription start site region 144835
Tssr144836 17 46227827 to 46227830 3 + TSS region transcription start site region 144836
Tssr144837 17 46227869 to 46227870 1 + TSS region transcription start site region 144837
Mir693 17 46231531 to 46231619 88 + miRNA gene microRNA 693
Gm22474 17 46232725 to 46232831 106 - snRNA gene predicted gene, 22474
Polr1c 17 46243920 to 46248045 4125 - protein coding gene polymerase (RNA) I polypeptide C
Cpgi9219 17 46247517 to 46248932 1415 CpG island CpG island 9219
Tssr148308 17 46247969 to 46248000 31 - TSS region transcription start site region 148308
Tssr144838 17 46248069 to 46248139 70 + TSS region transcription start site region 144838
Yipf3 17 46248080 to 46252537 4457 + protein coding gene Yip1 domain family, member 3
Tssr144839 17 46248173 to 46248176 3 + TSS region transcription start site region 144839
Tssr144840 17 46248192 to 46248201 9 + TSS region transcription start site region 144840
Cpgi9220 17 46253457 to 46254940 1483 CpG island CpG island 9220
Tssr144841 17 46253917 to 46253978 61 + TSS region transcription start site region 144841
Tssr144842 17 46253981 to 46253986 5 + TSS region transcription start site region 144842
Tssr144843 17 46254017 to 46254022 5 + TSS region transcription start site region 144843
Lrrc73 17 46254165 to 46257316 3151 + protein coding gene leucine rich repeat containing 73
Tjap1 17 46257851 to 46283026 25175 - protein coding gene tight junction associated protein 1
Tssr148309 17 46264595 to 46264596 1 - TSS region transcription start site region 148309
Tssr148310 17 46264933 to 46264953 20 - TSS region transcription start site region 148310
Tssr148311 17 46270788 to 46270809 21 - TSS region transcription start site region 148311
Tssr148312 17 46270813 to 46270824 11 - TSS region transcription start site region 148312
Tssr148313 17 46270851 to 46270864 13 - TSS region transcription start site region 148313
Gm26785 17 46273479 to 46280060 6581 + lincRNA gene predicted gene, 26785
Tssr148314 17 46282482 to 46282493 11 - TSS region transcription start site region 148314
Tssr148315 17 46282648 to 46282676 28 - TSS region transcription start site region 148315
Tssr148316 17 46282991 to 46283026 35 - TSS region transcription start site region 148316
D17Mit235 17 46284264 to 46284354 90 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 235