Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:45597819-45728094

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc29a1 17 45585200 to 45599603 14403 - protein coding gene solute carrier family 29 (nucleoside transporters), member 1
Cpgi9198 17 45599440 to 45599761 321 CpG island CpG island 9198
Tssr148257 17 45599581 to 45599597 16 - TSS region transcription start site region 148257
Tssr148258 17 45599604 to 45599623 19 - TSS region transcription start site region 148258
Mymx 17 45600971 to 45602102 1131 - protein coding gene myomixer, myoblast fusion factor
Cpgi9199 17 45601266 to 45601769 503 CpG island CpG island 9199
Tssr148259 17 45601835 to 45601844 9 - TSS region transcription start site region 148259
Tssr148260 17 45601885 to 45601928 43 - TSS region transcription start site region 148260
Tssr148261 17 45602045 to 45602056 11 - TSS region transcription start site region 148261
Tssr148262 17 45602070 to 45602086 16 - TSS region transcription start site region 148262
Tssr148263 17 45602096 to 45602108 12 - TSS region transcription start site region 148263
Tssr148264 17 45610125 to 45610174 49 - TSS region transcription start site region 148264
Tssr148265 17 45613025 to 45613073 48 - TSS region transcription start site region 148265
Gm25008 17 45620679 to 45620759 80 + snRNA gene predicted gene, 25008
Capn11 17 45630204 to 45659325 29121 - protein coding gene calpain 11
Cpgi9200 17 45630229 to 45630623 394 CpG island CpG island 9200
Cpgi9201 17 45642546 to 45642935 389 CpG island CpG island 9201
Tssr148266 17 45659312 to 45659335 23 - TSS region transcription start site region 148266
Tmem63b 17 45660172 to 45686254 26082 - protein coding gene transmembrane protein 63b
Cpgi9202 17 45661351 to 45661643 292 CpG island CpG island 9202
Cpgi9203 17 45662819 to 45663094 275 CpG island CpG island 9203
Cpgi9204 17 45663320 to 45663809 489 CpG island CpG island 9204
Gm16172 17 45663519 to 45666209 2690 + antisense lncRNA gene predicted gene 16172
Tssr148267 17 45674230 to 45674233 3 - TSS region transcription start site region 148267
Cpgi9205 17 45685167 to 45686783 1616 CpG island CpG island 9205
Tssr148268 17 45686080 to 45686087 7 - TSS region transcription start site region 148268
Tssr148269 17 45686133 to 45686185 52 - TSS region transcription start site region 148269
Tssr148270 17 45686210 to 45686213 3 - TSS region transcription start site region 148270
Tssr148271 17 45686214 to 45686265 51 - TSS region transcription start site region 148271
Mrpl14 17 45686322 to 45698495 12173 + protein coding gene mitochondrial ribosomal protein L14
Tssr144807 17 45686335 to 45686402 67 + TSS region transcription start site region 144807
Tssr148272 17 45686792 to 45686806 14 - TSS region transcription start site region 148272
Tssr148273 17 45686810 to 45686829 19 - TSS region transcription start site region 148273
Tssr148274 17 45686854 to 45686882 28 - TSS region transcription start site region 148274
Tssr148275 17 45686899 to 45686923 24 - TSS region transcription start site region 148275
Tssr144808 17 45695422 to 45695433 11 + TSS region transcription start site region 144808
Tssr144809 17 45699582 to 45699587 5 + TSS region transcription start site region 144809
Gm35456 17 45700864 to 45726904 26040 - lncRNA gene predicted gene, 35456
Tssr148276 17 45721066 to 45721106 40 - TSS region transcription start site region 148276
Cpgi9206 17 45724098 to 45724440 342 CpG island CpG island 9206
BE949265 17 45727825 to 45732218 4393 + unclassified gene cDNA sequence BE949265