Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:45572897-45612911

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hsp90ab1 17 45567778 to 45573261 5483 - protein coding gene heat shock protein 90 alpha (cytosolic), class B member 1
Cpgi9196 17 45572356 to 45574471 2115 CpG island CpG island 9196
Tssr148236 17 45572877 to 45572898 21 - TSS region transcription start site region 148236
Tssr148237 17 45573262 to 45573272 10 - TSS region transcription start site region 148237
Gm35399 17 45573315 to 45574790 1475 + lncRNA gene predicted gene, 35399
Tssr5131 17 45574084 to 45574087 3 + TSS region transcription start site region 5131
Slc29a1 17 45585200 to 45599603 14403 - protein coding gene solute carrier family 29 (nucleoside transporters), member 1
Gm17080 17 45586120 to 45588377 2257 + antisense lncRNA gene predicted gene 17080
Tssr148238 17 45592370 to 45592411 41 - TSS region transcription start site region 148238
Tssr148239 17 45592415 to 45592452 37 - TSS region transcription start site region 148239
Tssr148240 17 45592453 to 45592472 19 - TSS region transcription start site region 148240
Tssr148241 17 45592485 to 45592497 12 - TSS region transcription start site region 148241
Tssr148242 17 45592569 to 45592581 12 - TSS region transcription start site region 148242
Tssr148243 17 45592600 to 45592611 11 - TSS region transcription start site region 148243
Tssr148244 17 45592827 to 45592856 29 - TSS region transcription start site region 148244
Tssr148245 17 45592862 to 45592896 34 - TSS region transcription start site region 148245
Tssr148246 17 45592897 to 45592911 14 - TSS region transcription start site region 148246
Tssr148247 17 45592912 to 45592952 40 - TSS region transcription start site region 148247
Tssr148248 17 45593626 to 45593656 30 - TSS region transcription start site region 148248
Tssr148249 17 45593665 to 45593690 25 - TSS region transcription start site region 148249
Cpgi9197 17 45595051 to 45596098 1047 CpG island CpG island 9197
Tssr148250 17 45595503 to 45595575 72 - TSS region transcription start site region 148250
Tssr144806 17 45595642 to 45595678 36 + TSS region transcription start site region 144806
Tssr148251 17 45595717 to 45595746 29 - TSS region transcription start site region 148251
Tssr148252 17 45595757 to 45595768 11 - TSS region transcription start site region 148252
Tssr148253 17 45595842 to 45595867 25 - TSS region transcription start site region 148253
Tssr148254 17 45596657 to 45596666 9 - TSS region transcription start site region 148254
Tssr148255 17 45596683 to 45596699 16 - TSS region transcription start site region 148255
Tssr148256 17 45596708 to 45596720 12 - TSS region transcription start site region 148256
Cpgi9198 17 45599440 to 45599761 321 CpG island CpG island 9198
Tssr148257 17 45599581 to 45599597 16 - TSS region transcription start site region 148257
Tssr148258 17 45599604 to 45599623 19 - TSS region transcription start site region 148258
Mymx 17 45600971 to 45602102 1131 - protein coding gene myomixer, myoblast fusion factor
Cpgi9199 17 45601266 to 45601769 503 CpG island CpG island 9199
Tssr148259 17 45601835 to 45601844 9 - TSS region transcription start site region 148259
Tssr148260 17 45601885 to 45601928 43 - TSS region transcription start site region 148260
Tssr148261 17 45602045 to 45602056 11 - TSS region transcription start site region 148261
Tssr148262 17 45602070 to 45602086 16 - TSS region transcription start site region 148262
Tssr148263 17 45602096 to 45602108 12 - TSS region transcription start site region 148263
Tssr148264 17 45610125 to 45610174 49 - TSS region transcription start site region 148264