Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 17:45570679-45670759

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62 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hsp90ab1 17 45567778 to 45573261 5483 - protein coding gene heat shock protein 90 alpha (cytosolic), class B member 1
Tssr148228 17 45570699 to 45570714 15 - TSS region transcription start site region 148228
Tssr144805 17 45570722 to 45570729 7 + TSS region transcription start site region 144805
Tssr148229 17 45570786 to 45570805 19 - TSS region transcription start site region 148229
Tssr148230 17 45571037 to 45571064 27 - TSS region transcription start site region 148230
Tssr148231 17 45571068 to 45571073 5 - TSS region transcription start site region 148231
Tssr148232 17 45571126 to 45571158 32 - TSS region transcription start site region 148232
Tssr5130 17 45571462 to 45571484 22 - TSS region transcription start site region 5130
Tssr148233 17 45571503 to 45571559 56 - TSS region transcription start site region 148233
Cpgi9196 17 45572356 to 45574471 2115 CpG island CpG island 9196
Tssr148234 17 45572441 to 45572477 36 - TSS region transcription start site region 148234
Tssr148235 17 45572495 to 45572506 11 - TSS region transcription start site region 148235
Tssr148236 17 45572877 to 45572898 21 - TSS region transcription start site region 148236
Tssr148237 17 45573262 to 45573272 10 - TSS region transcription start site region 148237
Gm35399 17 45573315 to 45574790 1475 + lncRNA gene predicted gene, 35399
Tssr5131 17 45574084 to 45574087 3 + TSS region transcription start site region 5131
Slc29a1 17 45585200 to 45599606 14406 - protein coding gene solute carrier family 29 (nucleoside transporters), member 1
Gm17080 17 45586120 to 45588377 2257 + lncRNA gene predicted gene 17080
Tssr148238 17 45592370 to 45592411 41 - TSS region transcription start site region 148238
Tssr148239 17 45592415 to 45592452 37 - TSS region transcription start site region 148239
Tssr148240 17 45592453 to 45592472 19 - TSS region transcription start site region 148240
Tssr148241 17 45592485 to 45592497 12 - TSS region transcription start site region 148241
Tssr148242 17 45592569 to 45592581 12 - TSS region transcription start site region 148242
Tssr148243 17 45592600 to 45592611 11 - TSS region transcription start site region 148243
Tssr148244 17 45592827 to 45592856 29 - TSS region transcription start site region 148244
Tssr148245 17 45592862 to 45592896 34 - TSS region transcription start site region 148245
Tssr148246 17 45592897 to 45592911 14 - TSS region transcription start site region 148246
Tssr148247 17 45592912 to 45592952 40 - TSS region transcription start site region 148247
Tssr148248 17 45593626 to 45593656 30 - TSS region transcription start site region 148248
Tssr148249 17 45593665 to 45593690 25 - TSS region transcription start site region 148249
Cpgi9197 17 45595051 to 45596098 1047 CpG island CpG island 9197
Tssr148250 17 45595503 to 45595575 72 - TSS region transcription start site region 148250
Tssr144806 17 45595642 to 45595678 36 + TSS region transcription start site region 144806
Tssr148251 17 45595717 to 45595746 29 - TSS region transcription start site region 148251
Tssr148252 17 45595757 to 45595768 11 - TSS region transcription start site region 148252
Tssr148253 17 45595842 to 45595867 25 - TSS region transcription start site region 148253
Tssr148254 17 45596657 to 45596666 9 - TSS region transcription start site region 148254
Tssr148255 17 45596683 to 45596699 16 - TSS region transcription start site region 148255
Tssr148256 17 45596708 to 45596720 12 - TSS region transcription start site region 148256
Cpgi9198 17 45599440 to 45599761 321 CpG island CpG island 9198
Tssr148257 17 45599581 to 45599597 16 - TSS region transcription start site region 148257
Tssr148258 17 45599604 to 45599623 19 - TSS region transcription start site region 148258
Mymx 17 45600971 to 45602102 1131 - protein coding gene myomixer, myoblast fusion factor
Cpgi9199 17 45601266 to 45601769 503 CpG island CpG island 9199
Tssr148259 17 45601835 to 45601844 9 - TSS region transcription start site region 148259
Tssr148260 17 45601885 to 45601928 43 - TSS region transcription start site region 148260
Tssr148261 17 45602045 to 45602056 11 - TSS region transcription start site region 148261
Tssr148262 17 45602070 to 45602086 16 - TSS region transcription start site region 148262
Tssr148263 17 45602096 to 45602108 12 - TSS region transcription start site region 148263
Tssr148264 17 45610125 to 45610174 49 - TSS region transcription start site region 148264
Tssr148265 17 45613025 to 45613073 48 - TSS region transcription start site region 148265
Gm25008 17 45620679 to 45620759 80 + snRNA gene predicted gene, 25008
Gm52283 17 45625763 to 45626951 1188 - lncRNA gene predicted gene, 52283
Capn11 17 45630204 to 45659325 29121 - protein coding gene calpain 11
Cpgi9200 17 45630229 to 45630623 394 CpG island CpG island 9200
Cpgi9201 17 45642546 to 45642935 389 CpG island CpG island 9201
Tssr148266 17 45659312 to 45659335 23 - TSS region transcription start site region 148266
Tmem63b 17 45660172 to 45686343 26171 - protein coding gene transmembrane protein 63b
Cpgi9202 17 45661351 to 45661643 292 CpG island CpG island 9202
Cpgi9203 17 45662819 to 45663094 275 CpG island CpG island 9203
Cpgi9204 17 45663320 to 45663809 489 CpG island CpG island 9204
Gm16172 17 45663519 to 45666209 2690 + lncRNA gene predicted gene 16172