Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:44351990-44773172

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49872 17 44366568 to 44367903 1335 - lincRNA gene predicted gene, 49872
Runx2 17 44495987 to 44814797 318810 - protein coding gene runt related transcription factor 2
D17Mit269 17 44545676 to 44545810 134 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology-269
Tssr144756 17 44561980 to 44561996 16 + TSS region transcription start site region 144756
Runx2os3 17 44561990 to 44563172 1182 + antisense lncRNA gene runt related transcription factor 2, opposite strand 3
Tssr148162 17 44607500 to 44607520 20 - TSS region transcription start site region 148162
Tssr148163 17 44618575 to 44618579 4 - TSS region transcription start site region 148163
Tssr144757 17 44628189 to 44628193 4 + TSS region transcription start site region 144757
n-R5s27 17 44641025 to 44641143 118 - rRNA gene nuclear encoded rRNA 5S 27
Tssr148164 17 44643577 to 44643579 2 - TSS region transcription start site region 148164
Tssr148165 17 44654425 to 44654465 40 - TSS region transcription start site region 148165
Tssr148166 17 44658533 to 44658559 26 - TSS region transcription start site region 148166
Tssr148167 17 44658584 to 44658590 6 - TSS region transcription start site region 148167
D930007N19Rik 17 44680845 to 44683096 2251 unclassified gene RIKEN cDNA D930007N19 gene
Cfq4 17 44705665 to 49059374 4353709 QTL conditioned fear QTL 4
Tssr5125 17 44709984 to 44710023 39 - TSS region transcription start site region 5125
Runx2os2 17 44710222 to 44713925 3703 + antisense lncRNA gene runt related transcription factor 2, opposite strand 2
Tssr148168 17 44716740 to 44716744 4 - TSS region transcription start site region 148168
Tssr148169 17 44724224 to 44724227 3 - TSS region transcription start site region 148169
Cpgi9178 17 44734085 to 44736924 2839 CpG island CpG island 9178
Tssr144758 17 44734143 to 44734175 32 + TSS region transcription start site region 144758
Tssr148170 17 44735575 to 44735588 13 - TSS region transcription start site region 148170
Tssr148171 17 44735612 to 44735666 54 - TSS region transcription start site region 148171
Tssr144759 17 44735767 to 44735783 16 + TSS region transcription start site region 144759
Runx2os1 17 44735845 to 44737612 1767 + antisense lncRNA gene runt related transcription factor 2, opposite strand 1
Tssr5126 17 44736086 to 44736181 95 - TSS region transcription start site region 5126
Tssr144760 17 44736208 to 44736219 11 + TSS region transcription start site region 144760
Tssr148172 17 44736286 to 44736296 10 - TSS region transcription start site region 148172
Tssr148173 17 44736309 to 44736332 23 - TSS region transcription start site region 148173
Tssr148174 17 44736362 to 44736373 11 - TSS region transcription start site region 148174
Tssr148175 17 44736444 to 44736469 25 - TSS region transcription start site region 148175
Tssr148176 17 44736650 to 44736674 24 - TSS region transcription start site region 148176
Tssr148177 17 44738021 to 44738060 39 - TSS region transcription start site region 148177
D17Mit137 17 44757247 to 44757339 92 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 137