Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:43993689-44383702

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rcan2 17 43801351 to 44039516 238165 + protein coding gene regulator of calcineurin 2
Gm10498 17 44026251 to 44027398 1147 protein coding gene predicted gene 10498
Tssr144735 17 44026673 to 44026693 20 + TSS region transcription start site region 144735
Tssr144736 17 44038866 to 44038880 14 + TSS region transcription start site region 144736
Tssr144737 17 44038975 to 44038987 12 + TSS region transcription start site region 144737
Gm34857 17 44046517 to 44065109 18592 + lncRNA gene predicted gene, 34857
Cpgi9175 17 44078688 to 44079122 434 CpG island CpG island 9175
Tssr144738 17 44078825 to 44078910 85 + TSS region transcription start site region 144738
Enpp5 17 44078846 to 44086567 7721 + protein coding gene ectonucleotide pyrophosphatase/phosphodiesterase 5
Tssr144739 17 44078912 to 44078950 38 + TSS region transcription start site region 144739
Enpp4 17 44096308 to 44105809 9501 - protein coding gene ectonucleotide pyrophosphatase/phosphodiesterase 4
Cpgi9176 17 44105293 to 44106119 826 CpG island CpG island 9176
Tssr148157 17 44105682 to 44105697 15 - TSS region transcription start site region 148157
Tssr148158 17 44105728 to 44105767 39 - TSS region transcription start site region 148158
Tssr148159 17 44105774 to 44105845 71 - TSS region transcription start site region 148159
Tssr148160 17 44105887 to 44105896 9 - TSS region transcription start site region 148160
Tssr144740 17 44105910 to 44105933 23 + TSS region transcription start site region 144740
Tssr148161 17 44105917 to 44105963 46 - TSS region transcription start site region 148161
Gm34917 17 44105979 to 44124177 18198 + lncRNA gene predicted gene, 34917
Tssr144741 17 44107839 to 44107843 4 + TSS region transcription start site region 144741
Tssr144742 17 44125345 to 44125349 4 + TSS region transcription start site region 144742
Tssr144743 17 44134730 to 44134748 18 + TSS region transcription start site region 144743
Tssr144744 17 44134768 to 44134793 25 + TSS region transcription start site region 144744
Tssr144745 17 44134794 to 44134811 17 + TSS region transcription start site region 144745
Tssr144746 17 44134813 to 44134822 9 + TSS region transcription start site region 144746
Tssr144747 17 44172543 to 44172547 4 + TSS region transcription start site region 144747
Cpgi9177 17 44188171 to 44189143 972 CpG island CpG island 9177
Tssr144748 17 44188564 to 44188594 30 + TSS region transcription start site region 144748
Clic5 17 44188584 to 44280172 91588 + protein coding gene chloride intracellular channel 5
Tssr144749 17 44188603 to 44188618 15 + TSS region transcription start site region 144749
Tssr144750 17 44188625 to 44188632 7 + TSS region transcription start site region 144750
Tssr144751 17 44188653 to 44188664 11 + TSS region transcription start site region 144751
Tssr144752 17 44188665 to 44188676 11 + TSS region transcription start site region 144752
Tssr144753 17 44188689 to 44188702 13 + TSS region transcription start site region 144753
Tssr144754 17 44192719 to 44192722 3 + TSS region transcription start site region 144754
Tssr144755 17 44229777 to 44229781 4 + TSS region transcription start site region 144755
Tssr5123 17 44247487 to 44247490 3 + TSS region transcription start site region 5123
D17Mit136 17 44255717 to 44255861 144 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 136
Tssr5124 17 44279902 to 44279917 15 + TSS region transcription start site region 5124
Gm49872 17 44366568 to 44367903 1335 - lincRNA gene predicted gene, 49872