Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:43349324-43627812

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tir9 17 27659145 to 43574223 15915078 QTL trypanosome infection response 9
Tssr144671 17 43360020 to 43360030 10 + TSS region transcription start site region 144671
Tssr144672 17 43360322 to 43360336 14 + TSS region transcription start site region 144672
Tssr144673 17 43360363 to 43360382 19 + TSS region transcription start site region 144673
Tssr144674 17 43360386 to 43360409 23 + TSS region transcription start site region 144674
Tssr144675 17 43360423 to 43360456 33 + TSS region transcription start site region 144675
Adgrf5 17 43360451 to 43459557 99106 + protein coding gene adhesion G protein-coupled receptor F5
Tssr148115 17 43361351 to 43361356 5 - TSS region transcription start site region 148115
Tssr144676 17 43389436 to 43389497 61 + TSS region transcription start site region 144676
Tssr144677 17 43389501 to 43389513 12 + TSS region transcription start site region 144677
Tssr144678 17 43389526 to 43389539 13 + TSS region transcription start site region 144678
Tssr144679 17 43389542 to 43389562 20 + TSS region transcription start site region 144679
Tssr144680 17 43389579 to 43389594 15 + TSS region transcription start site region 144680
Gm25135 17 43454255 to 43454397 142 + snRNA gene predicted gene, 25135
Cpgi9169 17 43454964 to 43455169 205 CpG island CpG island 9169
Tssr144681 17 43455437 to 43455449 12 + TSS region transcription start site region 144681
Tssr144682 17 43455631 to 43455656 25 + TSS region transcription start site region 144682
Tssr148116 17 43457017 to 43457022 5 - TSS region transcription start site region 148116
Mep1a 17 43474324 to 43502812 28488 - protein coding gene meprin 1 alpha
Cpgi9170 17 43474969 to 43475161 192 CpG island CpG island 9170
Tssr144683 17 43477081 to 43477089 8 + TSS region transcription start site region 144683
Tssr148117 17 43477743 to 43477754 11 - TSS region transcription start site region 148117
Tssr148118 17 43477757 to 43477776 19 - TSS region transcription start site region 148118
Tssr148119 17 43477782 to 43477796 14 - TSS region transcription start site region 148119
Tssr148120 17 43490341 to 43490347 6 - TSS region transcription start site region 148120
Tssr148121 17 43502717 to 43502739 22 - TSS region transcription start site region 148121
Tssr148122 17 43502795 to 43502806 11 - TSS region transcription start site region 148122
Tssr148123 17 43504013 to 43504021 8 - TSS region transcription start site region 148123
Tssr148124 17 43504267 to 43504277 10 - TSS region transcription start site region 148124
Tssr148125 17 43504278 to 43504304 26 - TSS region transcription start site region 148125
Tssr148126 17 43504328 to 43504331 3 - TSS region transcription start site region 148126
Ankrd66 17 43534188 to 43543639 9451 - protein coding gene ankyrin repeat domain 66
Tssr144684 17 43535179 to 43535228 49 + TSS region transcription start site region 144684
Tssr148127 17 43538958 to 43538967 9 - TSS region transcription start site region 148127
Tssr148128 17 43551263 to 43551294 31 - TSS region transcription start site region 148128
Tssr148129 17 43557936 to 43557947 11 - TSS region transcription start site region 148129
Tssr144685 17 43567987 to 43568005 18 + TSS region transcription start site region 144685
Tssr144686 17 43568096 to 43568137 41 + TSS region transcription start site region 144686
Pla2g7 17 43568098 to 43612201 44103 + protein coding gene phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
Tssr144687 17 43568152 to 43568157 5 + TSS region transcription start site region 144687
Tssr144688 17 43568290 to 43568303 13 + TSS region transcription start site region 144688
Cpgi9171 17 43568323 to 43568491 168 CpG island CpG island 9171
Tssr144689 17 43568447 to 43568458 11 + TSS region transcription start site region 144689
Tssr144690 17 43568482 to 43568493 11 + TSS region transcription start site region 144690
Tssr144691 17 43568502 to 43568541 39 + TSS region transcription start site region 144691
Tssr148130 17 43568504 to 43568529 25 - TSS region transcription start site region 148130
Tssr144692 17 43568558 to 43568592 34 + TSS region transcription start site region 144692
Tssr144693 17 43568606 to 43568639 33 + TSS region transcription start site region 144693
Tssr144694 17 43568641 to 43568676 35 + TSS region transcription start site region 144694
Tssr144695 17 43568689 to 43568704 15 + TSS region transcription start site region 144695
Tssr144696 17 43568706 to 43568743 37 + TSS region transcription start site region 144696
Tssr144697 17 43569396 to 43569434 38 + TSS region transcription start site region 144697
Tssr148131 17 43569948 to 43569956 8 - TSS region transcription start site region 148131
Tssr148132 17 43569971 to 43569983 12 - TSS region transcription start site region 148132
Loco2 17 43574081 to 43574223 142 QTL locomotor activity 2
D17Mit168 17 43574081 to 43574223 142 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 168
Tssr144698 17 43576760 to 43576784 24 + TSS region transcription start site region 144698
1700071M16Rik 17 43588340 to 43591509 3169 - antisense lncRNA gene RIKEN cDNA 1700071M16 gene
Tssr144699 17 43588558 to 43588596 38 + TSS region transcription start site region 144699
Tssr144700 17 43588614 to 43588647 33 + TSS region transcription start site region 144700
Tssr144701 17 43588649 to 43588669 20 + TSS region transcription start site region 144701
Tssr148133 17 43591451 to 43591463 12 - TSS region transcription start site region 148133
Tssr148134 17 43591472 to 43591480 8 - TSS region transcription start site region 148134
Tssr148135 17 43591484 to 43591489 5 - TSS region transcription start site region 148135
Tssr148136 17 43591502 to 43591514 12 - TSS region transcription start site region 148136
Tssr148137 17 43592426 to 43592445 19 - TSS region transcription start site region 148137
Tssr144702 17 43592524 to 43592533 9 + TSS region transcription start site region 144702
Tssr144703 17 43594344 to 43594378 34 + TSS region transcription start site region 144703
Tssr144704 17 43594781 to 43594829 48 + TSS region transcription start site region 144704
Tssr144705 17 43594857 to 43594891 34 + TSS region transcription start site region 144705
Tssr144706 17 43600327 to 43600329 2 + TSS region transcription start site region 144706
Tssr144707 17 43602827 to 43602847 20 + TSS region transcription start site region 144707
Tssr144708 17 43604561 to 43604580 19 + TSS region transcription start site region 144708
Tssr144709 17 43604597 to 43604615 18 + TSS region transcription start site region 144709
Tssr144710 17 43607125 to 43607138 13 + TSS region transcription start site region 144710
Tssr144711 17 43607228 to 43607257 29 + TSS region transcription start site region 144711
Tssr144712 17 43607259 to 43607335 76 + TSS region transcription start site region 144712
Tssr148138 17 43607377 to 43607400 23 - TSS region transcription start site region 148138
Tssr144713 17 43611264 to 43611311 47 + TSS region transcription start site region 144713
Tssr144714 17 43611341 to 43611396 55 + TSS region transcription start site region 144714
Tssr144715 17 43611877 to 43611950 73 + TSS region transcription start site region 144715
Tssr148139 17 43612027 to 43612056 29 - TSS region transcription start site region 148139
Tssr148140 17 43612085 to 43612106 21 - TSS region transcription start site region 148140
Tssr148141 17 43612133 to 43612157 24 - TSS region transcription start site region 148141
Tssr148142 17 43612182 to 43612203 21 - TSS region transcription start site region 148142
Tdrd6 17 43615335 to 43630299 14964 - protein coding gene tudor domain containing 6
Tssr148143 17 43624408 to 43624418 10 - TSS region transcription start site region 148143