Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:42988008-43188025

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9166 17 43016394 to 43017934 1540 CpG island CpG island 9166
Tssr144657 17 43016509 to 43016518 9 + TSS region transcription start site region 144657
Tssr144658 17 43016522 to 43016535 13 + TSS region transcription start site region 144658
Tssr144659 17 43016536 to 43016591 55 + TSS region transcription start site region 144659
Tnfrsf21 17 43016555 to 43089188 72633 + protein coding gene tumor necrosis factor receptor superfamily, member 21
Tssr148111 17 43017547 to 43017558 11 - TSS region transcription start site region 148111
Cpgi9167 17 43026192 to 43026381 189 CpG island CpG island 9167
Tssr144660 17 43027122 to 43027123 1 + TSS region transcription start site region 144660
Tssr144661 17 43036348 to 43036382 34 + TSS region transcription start site region 144661
Tssr144662 17 43037684 to 43037696 12 + TSS region transcription start site region 144662
Tssr144663 17 43045917 to 43045933 16 + TSS region transcription start site region 144663
Tssr144664 17 43077311 to 43077318 7 + TSS region transcription start site region 144664
Tssr144665 17 43087762 to 43087773 11 + TSS region transcription start site region 144665
Tssr144666 17 43087898 to 43087912 14 + TSS region transcription start site region 144666
Tssr144667 17 43087989 to 43088002 13 + TSS region transcription start site region 144667
Tssr144668 17 43088008 to 43088025 17 + TSS region transcription start site region 144668
Gm34627 17 43109663 to 43117134 7471 - lncRNA gene predicted gene, 34627
Tssr148112 17 43113194 to 43113203 9 - TSS region transcription start site region 148112
A930008B05Rik 17 43132037 to 43133149 1112 unclassified gene RIKEN cDNA A930008B05 gene
Tssr144669 17 43138596 to 43138601 5 + TSS region transcription start site region 144669
E130008D07Rik 17 43146041 to 43158291 12250 - lincRNA gene RIKEN cDNA E130008D07 gene
Tssr148113 17 43157871 to 43157903 32 - TSS region transcription start site region 148113
Tssr148114 17 43158279 to 43158306 27 - TSS region transcription start site region 148114
Gm4635 17 43185874 to 43190698 4824 unclassified gene predicted gene 4635