Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:40947548-42557556

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mmut 17 40934685 to 40961988 27303 + protein coding gene methylmalonyl-Coenzyme A mutase
D17Mit126 17 41001605 to 41001741 136 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 126
Gm49854 17 41006048 to 41006306 258 - pseudogene predicted gene, 49854
Gm49855 17 41059652 to 41060057 405 - pseudogene predicted gene, 49855
Gm49857 17 41071123 to 41140201 69078 + lincRNA gene predicted gene, 49857
Ldha-ps3 17 41101038 to 41102228 1190 + pseudogene lactate dehydrogenase A, pseudogene 3
D17Ertd191e 17 41139454 to 41139654 200 DNA segment DNA segment, Chr 17, ERATO Doi 191, expressed
D17Mit105 17 41301859 to 41301973 114 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 105
Eae5 17 41301859 to 41301973 114 QTL experimental allergic encephalomyelitis susceptibility 5
Gm6771 17 41345997 to 41346997 1000 + pseudogene predicted gene 6771
Gm49858 17 41662393 to 41663688 1295 - pseudogene predicted gene, 49858
Tssr144649 17 41752548 to 41752556 8 + TSS region transcription start site region 144649
D17Mit263 17 41757485 to 41757587 102 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 263
D17Mit124 17 41798223 to 41798371 148 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 124
Cpgi9162 17 41958591 to 41958822 231 CpG island CpG island 9162
Gm19847 17 42010656 to 42010873 217 - pseudogene predicted gene, 19847
Cpgi9163 17 42315738 to 42316984 1246 CpG island CpG island 9163
Ptchd4 17 42315947 to 42505077 189130 + protein coding gene patched domain containing 4
Tssr144650 17 42316663 to 42316683 20 + TSS region transcription start site region 144650
B930007P11Rik 17 42340551 to 42343195 2644 unclassified gene RIKEN cDNA B930007P11 gene
Tssr148093 17 42372820 to 42372822 2 - TSS region transcription start site region 148093
Tssr144651 17 42380860 to 42380871 11 + TSS region transcription start site region 144651
Tssr144652 17 42435804 to 42435808 4 + TSS region transcription start site region 144652
Tssr144653 17 42501491 to 42501496 5 + TSS region transcription start site region 144653
Tssr144654 17 42508426 to 42508430 4 + TSS region transcription start site region 144654
Opn5 17 42556783 to 42611395 54612 - protein coding gene opsin 5