Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:40552104-40902110

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eye2 17 26286363 to 40794146 14507783 QTL eye weight 2
Gm29748 17 40552598 to 40552855 257 + pseudogene predicted gene, 29748
Gm46573 17 40554729 to 40557393 2664 + pseudogene predicted gene, 46573
Tssr144639 17 40561480 to 40561487 7 + TSS region transcription start site region 144639
Tssr144640 17 40561498 to 40561512 14 + TSS region transcription start site region 144640
Esp6 17 40561507 to 40565627 4120 + protein coding gene exocrine gland secreted peptide 6
Gm44501 17 40561507 to 40579549 18042 + protein coding gene predicted readthrough transcript, 44501
Esp5 17 40576593 to 40579049 2456 + protein coding gene exocrine gland secreted peptide 5
Tssr144641 17 40580440 to 40580446 6 + TSS region transcription start site region 144641
Esp4 17 40598594 to 40602618 4024 + protein coding gene exocrine gland secreted peptide 4
Esp3 17 40632075 to 40637060 4985 + protein coding gene exocrine gland secreted peptide 3
Gm49850 17 40698070 to 40700207 2137 + pseudogene predicted gene, 49850
D17Mit104 17 40724449 to 40724558 109 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 104
Tssr144642 17 40727104 to 40727110 6 + TSS region transcription start site region 144642
Esp1 17 40727120 to 40731782 4662 + protein coding gene exocrine gland secreted peptide 1
Crisp2 17 40764734 to 40794146 29412 - protein coding gene cysteine-rich secretory protein 2
Tssr148086 17 40792675 to 40792681 6 - TSS region transcription start site region 148086
Tssr148087 17 40794063 to 40794091 28 - TSS region transcription start site region 148087
Tssr144643 17 40811089 to 40811133 44 + TSS region transcription start site region 144643
Rhag 17 40811126 to 40840754 29628 + protein coding gene Rhesus blood group-associated A glycoprotein
Tssr144644 17 40811139 to 40811174 35 + TSS region transcription start site region 144644
Tssr144645 17 40811183 to 40811188 5 + TSS region transcription start site region 144645
Tssr144646 17 40816706 to 40816708 2 + TSS region transcription start site region 144646
Gm20574 17 40854036 to 40868141 14105 + pseudogene predicted gene, 20574
9130008F23Rik 17 40875482 to 40880558 5076 - protein coding gene RIKEN cDNA 9130008F23 gene
Cpgi9160 17 40879910 to 40880545 635 CpG island CpG island 9160
Tssr148088 17 40880022 to 40880027 5 - TSS region transcription start site region 148088
Tssr148089 17 40880344 to 40880358 14 - TSS region transcription start site region 148089
Tssr148090 17 40880525 to 40880579 54 - TSS region transcription start site region 148090