MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:40488594-40712618

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
C330004N01Rik	17	40455942 to 40495547	39605		lncRNA gene	RIKEN cDNA C330004N01 gene
Gm49845	17	40487473 to 40489700	2227	+	pseudogene	predicted gene, 49845
Gm49846	17	40499770 to 40516810	17040	+	pseudogene	predicted gene, 49846
Tssr144637	17	40520019 to 40520028	9	+	TSS region	transcription start site region 144637
Esp8	17	40520022 to 40530421	10399	+	protein coding gene	exocrine gland secreted peptide 8
Tssr144638	17	40520030 to 40520044	14	+	TSS region	transcription start site region 144638
Gm49847	17	40520157 to 40525059	4902	-	unclassified gene	predicted gene, 49847
Gm29748	17	40552598 to 40552855	257	+	pseudogene	predicted gene, 29748
Gm46573	17	40554729 to 40557393	2664	+	pseudogene	predicted gene, 46573
Tssr144639	17	40561480 to 40561487	7	+	TSS region	transcription start site region 144639
Tssr144640	17	40561498 to 40561512	14	+	TSS region	transcription start site region 144640
Gm44501	17	40561507 to 40579549	18042	+	protein coding gene	predicted readthrough transcript, 44501
Esp6	17	40561507 to 40565627	4120	+	protein coding gene	exocrine gland secreted peptide 6
Esp5	17	40576593 to 40579049	2456	+	protein coding gene	exocrine gland secreted peptide 5
Tssr144641	17	40580440 to 40580446	6	+	TSS region	transcription start site region 144641
Esp4	17	40598594 to 40602618	4024	+	protein coding gene	exocrine gland secreted peptide 4
Esp3	17	40632075 to 40637060	4985	+	protein coding gene	exocrine gland secreted peptide 3
Gm49850	17	40698070 to 40700207	2137	+	pseudogene	predicted gene, 49850