Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:36943477-37033927

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9146 17 36942548 to 36943637 1089 CpG island CpG island 9146
Rnf39 17 36943051 to 36947986 4935 + protein coding gene ring finger protein 39
Gm33595 17 36943457 to 36947111 3654 - lncRNA gene predicted gene, 33595
Cpgi9147 17 36946847 to 36947759 912 CpG island CpG island 9147
Ppp1r11 17 36948356 to 36951741 3385 - protein coding gene protein phosphatase 1, regulatory inhibitor subunit 11
Tssr147985 17 36951139 to 36951148 9 - TSS region transcription start site region 147985
Tssr147986 17 36951416 to 36951425 9 - TSS region transcription start site region 147986
Cpgi9148 17 36951482 to 36951799 317 CpG island CpG island 9148
Tssr147987 17 36951586 to 36951601 15 - TSS region transcription start site region 147987
Tssr147988 17 36951604 to 36951632 28 - TSS region transcription start site region 147988
Tssr147989 17 36951636 to 36951718 82 - TSS region transcription start site region 147989
Znrd1 17 36954349 to 36958520 4171 - protein coding gene zinc ribbon domain containing, 1
Cpgi9149 17 36957982 to 36958903 921 CpG island CpG island 9149
Tssr147990 17 36958175 to 36958198 23 - TSS region transcription start site region 147990
Tssr147991 17 36958206 to 36958234 28 - TSS region transcription start site region 147991
Tssr147992 17 36958261 to 36958284 23 - TSS region transcription start site region 147992
Tssr147993 17 36958417 to 36958433 16 - TSS region transcription start site region 147993
Tssr147994 17 36958437 to 36958500 63 - TSS region transcription start site region 147994
Tssr147995 17 36958538 to 36958554 16 - TSS region transcription start site region 147995
Tssr144523 17 36958558 to 36958569 11 + TSS region transcription start site region 144523
Tssr144524 17 36958571 to 36958611 40 + TSS region transcription start site region 144524
Znrd1as 17 36958592 to 36965625 7033 + protein coding gene zinc ribbon domain containing 1, antisense
Tssr144525 17 36958623 to 36958630 7 + TSS region transcription start site region 144525
Tssr144526 17 36958655 to 36958751 96 + TSS region transcription start site region 144526
Tssr144527 17 36963788 to 36963797 9 + TSS region transcription start site region 144527
Tssr144528 17 36963822 to 36963837 15 + TSS region transcription start site region 144528
Gm27735 17 36964357 to 36964432 75 - unclassified non-coding RNA gene predicted gene, 27735
D17Rua6 17 36968936 to 36969106 170 DNA segment DNA segment, Chr 17, Rutgers University 6
H2-M6-ps 17 36969207 to 36971396 2189 - pseudogene histocompatibility 2, M region locus 6, pseudogene
Tssr147996 17 36970609 to 36970620 11 - TSS region transcription start site region 147996
Tssr144529 17 36970725 to 36970739 14 + TSS region transcription start site region 144529
Tssr144530 17 36970802 to 36970835 33 + TSS region transcription start site region 144530
Tssr147997 17 36972918 to 36972932 14 - TSS region transcription start site region 147997
Tssr147998 17 36973257 to 36973273 16 - TSS region transcription start site region 147998
Tssr144531 17 36973585 to 36973634 49 + TSS region transcription start site region 144531
Tssr144532 17 36973683 to 36973694 11 + TSS region transcription start site region 144532
2410137M14Rik 17 36977701 to 36981237 3536 - protein coding gene RIKEN cDNA 2410137M14 gene
D17Rua5 17 36978240 to 36978390 150 DNA segment DNA segment, Chr 17, Rutgers University 5
H2-M4-ps 17 36980633 to 36980914 281 - pseudogene histocompatibility 2, M region locus 4, pseudogene
Tssr147999 17 36981221 to 36981234 13 - TSS region transcription start site region 147999
H2-M5 17 36986855 to 36989504 2649 - protein coding gene histocompatibility 2, M region locus 5
Cpgi9150 17 36988477 to 36988927 450 CpG island CpG island 9150
Tssr148000 17 36988574 to 36988587 13 - TSS region transcription start site region 148000
Tssr148001 17 36988731 to 36988743 12 - TSS region transcription start site region 148001
Tssr148002 17 36988759 to 36988778 19 - TSS region transcription start site region 148002
Tssr148003 17 36989528 to 36989536 8 - TSS region transcription start site region 148003
Tssr144533 17 36994309 to 36994320 11 + TSS region transcription start site region 144533
Tssr148004 17 36995492 to 36995527 35 - TSS region transcription start site region 148004
Zfp57 17 37001163 to 37010635 9472 + protein coding gene zinc finger protein 57
Cpgi9151 17 37002444 to 37003148 704 CpG island CpG island 9151
Tssr144534 17 37002487 to 37002499 12 + TSS region transcription start site region 144534
Tssr144535 17 37002510 to 37002524 14 + TSS region transcription start site region 144535
Tssr144536 17 37002527 to 37002569 42 + TSS region transcription start site region 144536
Tssr144537 17 37002574 to 37002586 12 + TSS region transcription start site region 144537
Tssr144538 17 37002610 to 37002617 7 + TSS region transcription start site region 144538
Tssr144539 17 37003683 to 37003686 3 + TSS region transcription start site region 144539
Tssr144540 17 37009885 to 37009900 15 + TSS region transcription start site region 144540
Tssr144541 17 37009967 to 37009968 1 + TSS region transcription start site region 144541
Mog 17 37010743 to 37023398 12655 - protein coding gene myelin oligodendrocyte glycoprotein
Gm22388 17 37015343 to 37015590 247 + unclassified non-coding RNA gene predicted gene, 22388
Tssr148005 17 37023217 to 37023230 13 - TSS region transcription start site region 148005
Tssr148006 17 37023238 to 37023320 82 - TSS region transcription start site region 148006
Tssr148007 17 37023330 to 37023341 11 - TSS region transcription start site region 148007
Tssr148008 17 37023349 to 37023371 22 - TSS region transcription start site region 148008
Cpgi9152 17 37028601 to 37028829 228 CpG island CpG island 9152
Gm33802 17 37031659 to 37045965 14306 - lncRNA gene predicted gene, 33802