Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:36024234-36196658

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A930015D03Rik 17 35994504 to 36038174 43670 + antisense lncRNA gene RIKEN cDNA A930015D03 gene
H2-T23 17 36029977 to 36032701 2724 - protein coding gene histocompatibility 2, T region locus 23
Tssr147946 17 36030620 to 36030653 33 - TSS region transcription start site region 147946
Cpgi9124 17 36031548 to 36032734 1186 CpG island CpG island 9124
Tssr147947 17 36032516 to 36032562 46 - TSS region transcription start site region 147947
Tssr147948 17 36032563 to 36032575 12 - TSS region transcription start site region 147948
Tssr5112 17 36032668 to 36032679 11 - TSS region transcription start site region 5112
Tssr147949 17 36032682 to 36032742 60 - TSS region transcription start site region 147949
H2-T22 17 36038407 to 36042743 4336 - protein coding gene histocompatibility 2, T region locus 22
Tssr147950 17 36042721 to 36042750 29 - TSS region transcription start site region 147950
Tssr144500 17 36042956 to 36042984 28 + TSS region transcription start site region 144500
Gm6034 17 36042961 to 36058645 15684 + protein coding gene predicted gene 6034
Tssr144501 17 36042992 to 36043012 20 + TSS region transcription start site region 144501
Tssr144502 17 36043026 to 36043027 1 + TSS region transcription start site region 144502
Tssr144503 17 36043047 to 36043056 9 + TSS region transcription start site region 144503
Tssr144504 17 36043823 to 36043839 16 + TSS region transcription start site region 144504
Tssr147951 17 36046561 to 36046570 9 - TSS region transcription start site region 147951
Gm11127 17 36055816 to 36058371 2555 - protein coding gene predicted gene 11127
Gm20950 17 36056315 to 36056838 523 - pseudogene predicted gene, 20950
Tssr5113 17 36058451 to 36058457 6 - TSS region transcription start site region 5113
Gm8810 17 36066108 to 36067753 1645 - pseudogene predicted gene 8810
H2-Bl 17 36080189 to 36084249 4060 - polymorphic pseudogene histocompatibility 2, blastocyst
Cpgi9125 17 36083280 to 36084316 1036 CpG island CpG island 9125
Tssr147952 17 36084232 to 36084255 23 - TSS region transcription start site region 147952
Gm20530 17 36094181 to 36094763 582 + pseudogene predicted gene 20530
Gm8815 17 36094968 to 36096805 1837 - pseudogene predicted gene 8815
H2-T-ps 17 36109234 to 36111658 2424 - pseudogene histocompatibility 2, T region locus, pseudogene
Cpgi9126 17 36111135 to 36111694 559 CpG island CpG island 9126
Tssr147953 17 36111674 to 36111696 22 - TSS region transcription start site region 147953
H2-T10 17 36115871 to 36121444 5573 - polymorphic pseudogene histocompatibility 2, T region locus 10
BC023719 17 36116242 to 36116860 618 + antisense lncRNA gene cDNA sequence BC023719
Tssr144505 17 36121666 to 36121698 32 + TSS region transcription start site region 144505
Gm19684 17 36121678 to 36129692 8014 + protein coding gene predicted gene, 19684
Tssr144506 17 36121757 to 36121763 6 + TSS region transcription start site region 144506
Gm7030 17 36127609 to 36129425 1816 - protein coding gene predicted gene 7030
Tssr147954 17 36129435 to 36129463 28 - TSS region transcription start site region 147954
Tssr147955 17 36129505 to 36129508 3 - TSS region transcription start site region 147955
Gm9574 17 36137188 to 36139105 1917 - pseudogene predicted gene 9574
Gm10499 17 36141758 to 36145923 4165 - pseudogene predicted gene 10499
Tssr144507 17 36143168 to 36143187 19 + TSS region transcription start site region 144507
Cpgi9127 17 36144800 to 36145983 1183 CpG island CpG island 9127
2410017I17Rik 17 36145018 to 36162374 17356 + lincRNA gene RIKEN cDNA 2410017I17 gene
Tssr147956 17 36145699 to 36145723 24 - TSS region transcription start site region 147956
Tssr147957 17 36145761 to 36145769 8 - TSS region transcription start site region 147957
Tssr147958 17 36145927 to 36145938 11 - TSS region transcription start site region 147958
Tssr147959 17 36145939 to 36145956 17 - TSS region transcription start site region 147959
Gm17782 17 36156531 to 36162079 5548 - pseudogene predicted gene, 17782
Cpgi9128 17 36157842 to 36158219 377 CpG island CpG island 9128
Gm6659 17 36157988 to 36158534 546 + pseudogene predicted gene 6659
Cpgi9129 17 36161256 to 36162072 816 CpG island CpG island 9129
Gm8909 17 36164443 to 36168537 4094 - protein coding gene predicted gene 8909
Cpgi9130 17 36167313 to 36168571 1258 CpG island CpG island 9130
Tssr144508 17 36167606 to 36167634 28 + TSS region transcription start site region 144508
Tssr147960 17 36167647 to 36167682 35 - TSS region transcription start site region 147960
Tssr147961 17 36167687 to 36167704 17 - TSS region transcription start site region 147961
Gm20478 17 36167982 to 36171805 3823 + antisense lncRNA gene predicted gene 20478
Tssr147962 17 36168513 to 36168528 15 - TSS region transcription start site region 147962
Tssr147963 17 36168532 to 36168546 14 - TSS region transcription start site region 147963
Cpgi9131 17 36178955 to 36179344 389 CpG island CpG island 9131
Gm6623 17 36179114 to 36179657 543 + pseudogene predicted gene 6623
Gm20495 17 36182196 to 36182430 234 - pseudogene predicted gene 20495
H2-T3 17 36185571 to 36190151 4580 - protein coding gene histocompatibility 2, T region locus 3
Cpgi9132 17 36189640 to 36189856 216 CpG island CpG island 9132
Tssr147964 17 36190121 to 36190158 37 - TSS region transcription start site region 147964
Tssr5114 17 36190220 to 36190262 42 - TSS region transcription start site region 5114
Tssr144509 17 36191435 to 36191455 20 + TSS region transcription start site region 144509
Gm4246 17 36194596 to 36194811 215 - pseudogene predicted gene 4246