Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35996108-36137753

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A930015D03Rik 17 35994504 to 36038174 43670 + antisense lncRNA gene RIKEN cDNA A930015D03 gene
Tssr144494 17 35998014 to 35998022 8 + TSS region transcription start site region 144494
Tssr144495 17 35998368 to 35998372 4 + TSS region transcription start site region 144495
Tssr144496 17 36000662 to 36000681 19 + TSS region transcription start site region 144496
H2-T24 17 36005695 to 36020560 14865 - protein coding gene histocompatibility 2, T region locus 24
Tssr147939 17 36006324 to 36006341 17 - TSS region transcription start site region 147939
Tssr147940 17 36006409 to 36006435 26 - TSS region transcription start site region 147940
Tssr147941 17 36006574 to 36006593 19 - TSS region transcription start site region 147941
Tssr147942 17 36006627 to 36006652 25 - TSS region transcription start site region 147942
Tssr147943 17 36015586 to 36015602 16 - TSS region transcription start site region 147943
Tssr147944 17 36020493 to 36020509 16 - TSS region transcription start site region 147944
Tssr147945 17 36020528 to 36020570 42 - TSS region transcription start site region 147945
Tssr144497 17 36020979 to 36021001 22 + TSS region transcription start site region 144497
Tssr144498 17 36023819 to 36023851 32 + TSS region transcription start site region 144498
Tssr144499 17 36023852 to 36023875 23 + TSS region transcription start site region 144499
H2-T23 17 36029977 to 36032701 2724 - protein coding gene histocompatibility 2, T region locus 23
Tssr147946 17 36030620 to 36030653 33 - TSS region transcription start site region 147946
Cpgi9124 17 36031548 to 36032734 1186 CpG island CpG island 9124
Tssr147947 17 36032516 to 36032562 46 - TSS region transcription start site region 147947
Tssr147948 17 36032563 to 36032575 12 - TSS region transcription start site region 147948
Tssr5112 17 36032668 to 36032679 11 - TSS region transcription start site region 5112
Tssr147949 17 36032682 to 36032742 60 - TSS region transcription start site region 147949
H2-T22 17 36038407 to 36042743 4336 - protein coding gene histocompatibility 2, T region locus 22
Tssr147950 17 36042721 to 36042750 29 - TSS region transcription start site region 147950
Tssr144500 17 36042956 to 36042984 28 + TSS region transcription start site region 144500
Gm6034 17 36042961 to 36058645 15684 + protein coding gene predicted gene 6034
Tssr144501 17 36042992 to 36043012 20 + TSS region transcription start site region 144501
Tssr144502 17 36043026 to 36043027 1 + TSS region transcription start site region 144502
Tssr144503 17 36043047 to 36043056 9 + TSS region transcription start site region 144503
Tssr144504 17 36043823 to 36043839 16 + TSS region transcription start site region 144504
Tssr147951 17 36046561 to 36046570 9 - TSS region transcription start site region 147951
Gm11127 17 36055816 to 36058371 2555 - protein coding gene predicted gene 11127
Gm20950 17 36056315 to 36056838 523 - pseudogene predicted gene, 20950
Tssr5113 17 36058451 to 36058457 6 - TSS region transcription start site region 5113
Gm8810 17 36066108 to 36067753 1645 - pseudogene predicted gene 8810
H2-Bl 17 36080189 to 36084249 4060 - polymorphic pseudogene histocompatibility 2, blastocyst
Cpgi9125 17 36083280 to 36084316 1036 CpG island CpG island 9125
Tssr147952 17 36084232 to 36084255 23 - TSS region transcription start site region 147952
Gm20530 17 36094181 to 36094763 582 + pseudogene predicted gene 20530
Gm8815 17 36094968 to 36096805 1837 - pseudogene predicted gene 8815
H2-T-ps 17 36109234 to 36111658 2424 - pseudogene histocompatibility 2, T region locus, pseudogene
Cpgi9126 17 36111135 to 36111694 559 CpG island CpG island 9126
Tssr147953 17 36111674 to 36111696 22 - TSS region transcription start site region 147953
H2-T10 17 36115871 to 36121444 5573 - polymorphic pseudogene histocompatibility 2, T region locus 10
BC023719 17 36116242 to 36116860 618 + antisense lncRNA gene cDNA sequence BC023719
Tssr144505 17 36121666 to 36121698 32 + TSS region transcription start site region 144505
Gm19684 17 36121678 to 36129692 8014 + protein coding gene predicted gene, 19684
Tssr144506 17 36121757 to 36121763 6 + TSS region transcription start site region 144506
Gm7030 17 36127609 to 36129425 1816 - protein coding gene predicted gene 7030
Tssr147954 17 36129435 to 36129463 28 - TSS region transcription start site region 147954
Tssr147955 17 36129505 to 36129508 3 - TSS region transcription start site region 147955
Gm9574 17 36137188 to 36139105 1917 - pseudogene predicted gene 9574