Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35821071-35911085

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136 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9107 17 35821667 to 35822483 816 CpG island CpG island 9107
Tssr144408 17 35821675 to 35821693 18 + TSS region transcription start site region 144408
Ier3 17 35821713 to 35822911 1198 + protein coding gene immediate early response 3
Cpgi9108 17 35823150 to 35823594 444 CpG island CpG island 9108
Flot1 17 35823320 to 35832787 9467 + protein coding gene flotillin 1
Tssr144409 17 35823327 to 35823371 44 + TSS region transcription start site region 144409
Tssr144410 17 35823373 to 35823424 51 + TSS region transcription start site region 144410
Tssr144411 17 35823425 to 35823436 11 + TSS region transcription start site region 144411
Tssr144412 17 35823509 to 35823547 38 + TSS region transcription start site region 144412
Tssr144413 17 35823558 to 35823571 13 + TSS region transcription start site region 144413
Cpgi9109 17 35829762 to 35830086 324 CpG island CpG island 9109
Tssr144414 17 35829968 to 35829991 23 + TSS region transcription start site region 144414
Tubb5 17 35833920 to 35838301 4381 - protein coding gene tubulin, beta 5 class I
Tssr147883 17 35833973 to 35833974 1 - TSS region transcription start site region 147883
Tssr147884 17 35834045 to 35834073 28 - TSS region transcription start site region 147884
Tssr147885 17 35834326 to 35834341 15 - TSS region transcription start site region 147885
Tssr147886 17 35834364 to 35834392 28 - TSS region transcription start site region 147886
Tssr147887 17 35834476 to 35834494 18 - TSS region transcription start site region 147887
Tssr147888 17 35834589 to 35834615 26 - TSS region transcription start site region 147888
Tssr147889 17 35834691 to 35834700 9 - TSS region transcription start site region 147889
Tssr147890 17 35834740 to 35834844 104 - TSS region transcription start site region 147890
Tssr147891 17 35834895 to 35834998 103 - TSS region transcription start site region 147891
Tssr147892 17 35835130 to 35835195 65 - TSS region transcription start site region 147892
Tssr147893 17 35835385 to 35835413 28 - TSS region transcription start site region 147893
Tssr147894 17 35835442 to 35835480 38 - TSS region transcription start site region 147894
Tssr147895 17 35835496 to 35835520 24 - TSS region transcription start site region 147895
Tssr144415 17 35835517 to 35835539 22 + TSS region transcription start site region 144415
Tssr147896 17 35835534 to 35835567 33 - TSS region transcription start site region 147896
Tssr147897 17 35835571 to 35835617 46 - TSS region transcription start site region 147897
Tssr144416 17 35835621 to 35835675 54 + TSS region transcription start site region 144416
Tssr147898 17 35835626 to 35835704 78 - TSS region transcription start site region 147898
Tssr147899 17 35835762 to 35835783 21 - TSS region transcription start site region 147899
Tssr147900 17 35835803 to 35835814 11 - TSS region transcription start site region 147900
Tssr5110 17 35835833 to 35835855 22 - TSS region transcription start site region 5110
Tssr5111 17 35835864 to 35835901 37 - TSS region transcription start site region 5111
Tssr147901 17 35835910 to 35835927 17 - TSS region transcription start site region 147901
Tssr147902 17 35835931 to 35835966 35 - TSS region transcription start site region 147902
Tssr147903 17 35835970 to 35836000 30 - TSS region transcription start site region 147903
Tssr147904 17 35836001 to 35836033 32 - TSS region transcription start site region 147904
Tssr147905 17 35836205 to 35836281 76 - TSS region transcription start site region 147905
Cpgi9110 17 35836550 to 35837289 739 CpG island CpG island 9110
Tssr147906 17 35836687 to 35836731 44 - TSS region transcription start site region 147906
Tssr147907 17 35837031 to 35837078 47 - TSS region transcription start site region 147907
Cpgi9111 17 35838164 to 35838405 241 CpG island CpG island 9111
Tssr147908 17 35838219 to 35838243 24 - TSS region transcription start site region 147908
Tssr147909 17 35838259 to 35838264 5 - TSS region transcription start site region 147909
Gm32463 17 35838997 to 35840780 1783 + lncRNA gene predicted gene, 32463
Cpgi9112 17 35841187 to 35841980 793 CpG island CpG island 9112
Tssr147910 17 35841333 to 35841361 28 - TSS region transcription start site region 147910
Tssr144417 17 35841491 to 35841505 14 + TSS region transcription start site region 144417
Mdc1 17 35841515 to 35859670 18155 + protein coding gene mediator of DNA damage checkpoint 1
Tssr144418 17 35841603 to 35841659 56 + TSS region transcription start site region 144418
Tssr144419 17 35841668 to 35841683 15 + TSS region transcription start site region 144419
Tssr144420 17 35841698 to 35841721 23 + TSS region transcription start site region 144420
Tssr144421 17 35841791 to 35841805 14 + TSS region transcription start site region 144421
Tssr144422 17 35841823 to 35841834 11 + TSS region transcription start site region 144422
Tssr144423 17 35841881 to 35841889 8 + TSS region transcription start site region 144423
Tssr144424 17 35854832 to 35854841 9 + TSS region transcription start site region 144424
Tssr144425 17 35854886 to 35854892 6 + TSS region transcription start site region 144425
Ppp1r18os 17 35860918 to 35866886 5968 - antisense lncRNA gene protein phosphatase 1, regulatory subunit 18, opposite strand
Cpgi9113 17 35861098 to 35861742 644 CpG island CpG island 9113
Tssr144426 17 35861241 to 35861246 5 + TSS region transcription start site region 144426
Tssr144427 17 35861264 to 35861271 7 + TSS region transcription start site region 144427
Tssr144428 17 35861280 to 35861296 16 + TSS region transcription start site region 144428
Nrm 17 35861318 to 35865400 4082 + protein coding gene nurim (nuclear envelope membrane protein)
Tssr144429 17 35861325 to 35861339 14 + TSS region transcription start site region 144429
Tssr144430 17 35861343 to 35861380 37 + TSS region transcription start site region 144430
Cpgi9114 17 35865497 to 35866892 1395 CpG island CpG island 9114
Ppp1r18 17 35865593 to 35875596 10003 + protein coding gene protein phosphatase 1, regulatory subunit 18
Tssr147911 17 35865704 to 35865707 3 - TSS region transcription start site region 147911
Tssr144431 17 35865787 to 35865843 56 + TSS region transcription start site region 144431
Tssr144432 17 35866071 to 35866085 14 + TSS region transcription start site region 144432
Tssr144433 17 35866121 to 35866144 23 + TSS region transcription start site region 144433
Tssr144434 17 35866152 to 35866203 51 + TSS region transcription start site region 144434
Tssr144435 17 35866245 to 35866256 11 + TSS region transcription start site region 144435
Tssr147912 17 35866493 to 35866511 18 - TSS region transcription start site region 147912
Tssr144436 17 35866606 to 35866675 69 + TSS region transcription start site region 144436
Tssr144437 17 35866677 to 35866699 22 + TSS region transcription start site region 144437
Tssr144438 17 35866700 to 35866719 19 + TSS region transcription start site region 144438
Tssr144439 17 35866821 to 35866832 11 + TSS region transcription start site region 144439
Tssr144440 17 35866842 to 35866852 10 + TSS region transcription start site region 144440
Tssr144441 17 35866855 to 35866877 22 + TSS region transcription start site region 144441
Tssr144442 17 35866932 to 35866946 14 + TSS region transcription start site region 144442
Tssr147913 17 35866948 to 35866960 12 - TSS region transcription start site region 147913
Tssr144443 17 35867041 to 35867058 17 + TSS region transcription start site region 144443
Tssr144444 17 35867149 to 35867166 17 + TSS region transcription start site region 144444
Tssr144445 17 35867179 to 35867233 54 + TSS region transcription start site region 144445
Cpgi9115 17 35867184 to 35867352 168 CpG island CpG island 9115
Tssr144446 17 35867745 to 35867775 30 + TSS region transcription start site region 144446
Tssr144447 17 35867778 to 35867789 11 + TSS region transcription start site region 144447
Tssr144448 17 35868003 to 35868014 11 + TSS region transcription start site region 144448
Tssr147914 17 35868296 to 35868333 37 - TSS region transcription start site region 147914
Gm28033 17 35868302 to 35868397 95 - miRNA gene predicted gene, 28033
Tssr144449 17 35868382 to 35868449 67 + TSS region transcription start site region 144449
Tssr144450 17 35868455 to 35868459 4 + TSS region transcription start site region 144450
Tssr144451 17 35868461 to 35868492 31 + TSS region transcription start site region 144451
Tssr144452 17 35868517 to 35868521 4 + TSS region transcription start site region 144452
Tssr144453 17 35868579 to 35868590 11 + TSS region transcription start site region 144453
Tssr144454 17 35868618 to 35868647 29 + TSS region transcription start site region 144454
Tssr144455 17 35868718 to 35868730 12 + TSS region transcription start site region 144455
Tssr144456 17 35869667 to 35869716 49 + TSS region transcription start site region 144456
Tssr144457 17 35873826 to 35873838 12 + TSS region transcription start site region 144457
Tssr144458 17 35873868 to 35873914 46 + TSS region transcription start site region 144458
Tssr144459 17 35874934 to 35874941 7 + TSS region transcription start site region 144459
Tssr144460 17 35874973 to 35874999 26 + TSS region transcription start site region 144460
Tssr144461 17 35875085 to 35875110 25 + TSS region transcription start site region 144461
Cpgi9116 17 35879435 to 35880291 856 CpG island CpG island 9116
Tssr144462 17 35879770 to 35879824 54 + TSS region transcription start site region 144462
Dhx16 17 35879819 to 35892670 12851 + protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 16
Tssr144463 17 35879825 to 35879845 20 + TSS region transcription start site region 144463
Tssr144464 17 35879895 to 35879909 14 + TSS region transcription start site region 144464
Tssr144465 17 35879953 to 35879962 9 + TSS region transcription start site region 144465
Tssr144466 17 35887872 to 35888023 151 + TSS region transcription start site region 144466
Tssr144467 17 35888125 to 35888139 14 + TSS region transcription start site region 144467
2310061I04Rik 17 35892677 to 35897378 4701 - protein coding gene RIKEN cDNA 2310061I04 gene
Tssr147915 17 35895990 to 35896001 11 - TSS region transcription start site region 147915
Tssr147916 17 35896022 to 35896061 39 - TSS region transcription start site region 147916
Cpgi9117 17 35896676 to 35898046 1370 CpG island CpG island 9117
Tssr147917 17 35897079 to 35897141 62 - TSS region transcription start site region 147917
Tssr147918 17 35897299 to 35897324 25 - TSS region transcription start site region 147918
Tssr147919 17 35897326 to 35897331 5 - TSS region transcription start site region 147919
Tssr147920 17 35897342 to 35897369 27 - TSS region transcription start site region 147920
Tssr147921 17 35897371 to 35897418 47 - TSS region transcription start site region 147921
Atat1 17 35897595 to 35910075 12480 - protein coding gene alpha tubulin acetyltransferase 1
Tssr147922 17 35900721 to 35900740 19 - TSS region transcription start site region 147922
Tssr147923 17 35901435 to 35901452 17 - TSS region transcription start site region 147923
Tssr147924 17 35901543 to 35901569 26 - TSS region transcription start site region 147924
Tssr147925 17 35908907 to 35908924 17 - TSS region transcription start site region 147925
Tssr147926 17 35909224 to 35909246 22 - TSS region transcription start site region 147926
Gm16279 17 35909423 to 35913288 3865 + antisense lncRNA gene predicted gene 16279
Tssr147927 17 35909677 to 35909700 23 - TSS region transcription start site region 147927
Tssr144468 17 35909729 to 35909755 26 + TSS region transcription start site region 144468
Cpgi9118 17 35909789 to 35910176 387 CpG island CpG island 9118
Tssr147928 17 35910000 to 35910029 29 - TSS region transcription start site region 147928
Tssr147929 17 35910032 to 35910076 44 - TSS region transcription start site region 147929
Mrps18b 17 35910379 to 35916389 6010 - protein coding gene mitochondrial ribosomal protein S18B