MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:35655517-35685538

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm20483	17	35651828 to 35660367	8539	+	antisense lncRNA gene	predicted gene 20483
Vars2	17	35655634 to 35667592	11958	-	protein coding gene	valyl-tRNA synthetase 2, mitochondrial
Cpgi9104	17	35666975 to 35668131	1156		CpG island	CpG island 9104
Tssr147850	17	35667325 to 35667348	23	-	TSS region	transcription start site region 147850
Tssr147851	17	35667484 to 35667496	12	-	TSS region	transcription start site region 147851
Tssr147852	17	35667546 to 35667618	72	-	TSS region	transcription start site region 147852
Tssr144403	17	35667661 to 35667677	16	+	TSS region	transcription start site region 144403
Gtf2h4	17	35667730 to 35673739	6009	-	protein coding gene	general transcription factor II H, polypeptide 4
Tssr147853	17	35669873 to 35669892	19	-	TSS region	transcription start site region 147853
Tssr147854	17	35670481 to 35670510	29	-	TSS region	transcription start site region 147854
Tssr147855	17	35670517 to 35670538	21	-	TSS region	transcription start site region 147855
Tssr147856	17	35673675 to 35673700	25	-	TSS region	transcription start site region 147856
Tssr147857	17	35673705 to 35673721	16	-	TSS region	transcription start site region 147857
Tssr147858	17	35673738 to 35673750	12	-	TSS region	transcription start site region 147858
Tssr147859	17	35680727 to 35680744	17	-	TSS region	transcription start site region 147859
Ddr1	17	35681567 to 35704621	23054	-	protein coding gene	discoidin domain receptor family, member 1
Tssr147860	17	35685420 to 35685431	11	-	TSS region	transcription start site region 147860