Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35642040-35762068

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mucl3 17 35635755 to 35643695 7940 - protein coding gene mucin like 3
Tssr147849 17 35643684 to 35643699 15 - TSS region transcription start site region 147849
Sfta2 17 35649708 to 35650569 861 + protein coding gene surfactant associated 2
Tssr5109 17 35649730 to 35649735 5 + TSS region transcription start site region 5109
Tssr144400 17 35649756 to 35649768 12 + TSS region transcription start site region 144400
Tssr144401 17 35649769 to 35649797 28 + TSS region transcription start site region 144401
Tssr144402 17 35649816 to 35649848 32 + TSS region transcription start site region 144402
Gm20483 17 35651828 to 35660367 8539 + antisense lncRNA gene predicted gene 20483
Vars2 17 35655634 to 35667592 11958 - protein coding gene valyl-tRNA synthetase 2, mitochondrial
Cpgi9104 17 35666975 to 35668131 1156 CpG island CpG island 9104
Tssr147850 17 35667325 to 35667348 23 - TSS region transcription start site region 147850
Tssr147851 17 35667484 to 35667496 12 - TSS region transcription start site region 147851
Tssr147852 17 35667546 to 35667618 72 - TSS region transcription start site region 147852
Tssr144403 17 35667661 to 35667677 16 + TSS region transcription start site region 144403
Gtf2h4 17 35667730 to 35673739 6009 - protein coding gene general transcription factor II H, polypeptide 4
Tssr147853 17 35669873 to 35669892 19 - TSS region transcription start site region 147853
Tssr147854 17 35670481 to 35670510 29 - TSS region transcription start site region 147854
Tssr147855 17 35670517 to 35670538 21 - TSS region transcription start site region 147855
Tssr147856 17 35673675 to 35673700 25 - TSS region transcription start site region 147856
Tssr147857 17 35673705 to 35673721 16 - TSS region transcription start site region 147857
Tssr147858 17 35673738 to 35673750 12 - TSS region transcription start site region 147858
Tssr147859 17 35680727 to 35680744 17 - TSS region transcription start site region 147859
Ddr1 17 35681567 to 35704621 23054 - protein coding gene discoidin domain receptor family, member 1
Tssr147860 17 35685420 to 35685431 11 - TSS region transcription start site region 147860
Tssr147861 17 35688989 to 35689031 42 - TSS region transcription start site region 147861
Tssr147862 17 35690384 to 35690421 37 - TSS region transcription start site region 147862
Tssr147863 17 35697702 to 35697750 48 - TSS region transcription start site region 147863
Tssr147864 17 35697770 to 35697781 11 - TSS region transcription start site region 147864
Tssr147865 17 35697980 to 35698001 21 - TSS region transcription start site region 147865
Tssr147866 17 35698006 to 35698031 25 - TSS region transcription start site region 147866
Gm23864 17 35699203 to 35699309 106 - snRNA gene predicted gene, 23864
Cpgi9105 17 35699891 to 35701132 1241 CpG island CpG island 9105
Tssr147867 17 35700486 to 35700516 30 - TSS region transcription start site region 147867
Tssr147868 17 35700520 to 35700606 86 - TSS region transcription start site region 147868
Tssr147869 17 35701937 to 35701946 9 - TSS region transcription start site region 147869
Tssr147870 17 35702003 to 35702016 13 - TSS region transcription start site region 147870
Tssr147871 17 35702022 to 35702037 15 - TSS region transcription start site region 147871
Tssr147872 17 35702040 to 35702068 28 - TSS region transcription start site region 147872
Tssr147873 17 35702216 to 35702228 12 - TSS region transcription start site region 147873
Tssr147874 17 35702297 to 35702374 77 - TSS region transcription start site region 147874
Gm4577 17 35703896 to 35708244 4348 + antisense lncRNA gene predicted gene 4577
Tssr147875 17 35703971 to 35703994 23 - TSS region transcription start site region 147875
Tssr147876 17 35704000 to 35704091 91 - TSS region transcription start site region 147876
Tssr147877 17 35704574 to 35704632 58 - TSS region transcription start site region 147877
Tssr144404 17 35704904 to 35704910 6 + TSS region transcription start site region 144404
Tssr147878 17 35731853 to 35731895 42 - TSS region transcription start site region 147878
Gm20443 17 35737734 to 35739806 2072 - lincRNA gene predicted gene 20443
Gm20442 17 35743323 to 35764191 20868 - lincRNA gene predicted gene 20442
Tssr147879 17 35744100 to 35744138 38 - TSS region transcription start site region 147879