Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35471028-35541049

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9102 17 35469776 to 35471072 1296 CpG island CpG island 9102
H2-Q10 17 35470089 to 35474563 4474 + protein coding gene histocompatibility 2, Q region locus 10
Tssr144377 17 35471644 to 35471683 39 + TSS region transcription start site region 144377
Tssr144378 17 35473482 to 35473490 8 + TSS region transcription start site region 144378
Gm32362 17 35500641 to 35505737 5096 - lncRNA gene predicted gene, 32362
Tssr147838 17 35503924 to 35503936 12 - TSS region transcription start site region 147838
Tssr147839 17 35505912 to 35505934 22 - TSS region transcription start site region 147839
Tssr144379 17 35506028 to 35506049 21 + TSS region transcription start site region 144379
Pou5f1 17 35506032 to 35510777 4745 + protein coding gene POU domain, class 5, transcription factor 1
Tssr144380 17 35506052 to 35506069 17 + TSS region transcription start site region 144380
Tssr144381 17 35506243 to 35506254 11 + TSS region transcription start site region 144381
Tssr144382 17 35506256 to 35506269 13 + TSS region transcription start site region 144382
Tssr144383 17 35506327 to 35506339 12 + TSS region transcription start site region 144383
Tssr144384 17 35506404 to 35506415 11 + TSS region transcription start site region 144384
Tssr144385 17 35506426 to 35506444 18 + TSS region transcription start site region 144385
Gm19553 17 35509077 to 35510551 1474 - antisense lncRNA gene predicted gene, 19553
Tssr144386 17 35509410 to 35509424 14 + TSS region transcription start site region 144386
Tssr144387 17 35509434 to 35509452 18 + TSS region transcription start site region 144387
Tssr144388 17 35510071 to 35510092 21 + TSS region transcription start site region 144388
Tcf19 17 35512735 to 35516824 4089 - protein coding gene transcription factor 19
Cpgi9103 17 35516637 to 35517424 787 CpG island CpG island 9103
Tssr147840 17 35516780 to 35516835 55 - TSS region transcription start site region 147840
Cchcr1 17 35517100 to 35531015 13915 + protein coding gene coiled-coil alpha-helical rod protein 1
Tssr144389 17 35517242 to 35517259 17 + TSS region transcription start site region 144389
Tssr144390 17 35517261 to 35517271 10 + TSS region transcription start site region 144390
Tssr144391 17 35532941 to 35532948 7 + TSS region transcription start site region 144391
Tssr144392 17 35533194 to 35533208 14 + TSS region transcription start site region 144392
Psors1c2 17 35533201 to 35534647 1446 + protein coding gene psoriasis susceptibility 1 candidate 2 (human)
Tssr147841 17 35533951 to 35533962 11 - TSS region transcription start site region 147841
Tssr5105 17 35534103 to 35534119 16 + TSS region transcription start site region 5105
Tssr5106 17 35534129 to 35534138 9 - TSS region transcription start site region 5106
Tssr147842 17 35534159 to 35534166 7 - TSS region transcription start site region 147842
Tssr147843 17 35534243 to 35534256 13 - TSS region transcription start site region 147843