Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35354877-35498361

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9095 17 35358866 to 35359823 957 CpG island CpG island 9095
Tssr144360 17 35358969 to 35358989 20 + TSS region transcription start site region 144360
H2-Q3 17 35358989 to 35359972 983 + pseudogene histocompatibility 2, Q region locus 3
Gm11131 17 35377021 to 35380292 3271 - antisense lncRNA gene predicted gene 11131
Cpgi9096 17 35379490 to 35380606 1116 CpG island CpG island 9096
Tssr144361 17 35379586 to 35379600 14 + TSS region transcription start site region 144361
Tssr144362 17 35379608 to 35379637 29 + TSS region transcription start site region 144362
H2-Q4 17 35379617 to 35384674 5057 + protein coding gene histocompatibility 2, Q region locus 4
Tssr147836 17 35380256 to 35380277 21 - TSS region transcription start site region 147836
Tssr144363 17 35380403 to 35380435 32 + TSS region transcription start site region 144363
Tssr144364 17 35381543 to 35381548 5 + TSS region transcription start site region 144364
Tssr144365 17 35384195 to 35384226 31 + TSS region transcription start site region 144365
Gm41576 17 35389547 to 35390085 538 + lncRNA gene predicted gene, 41576
Cpgi9097 17 35394094 to 35394609 515 CpG island CpG island 9097
Tssr144366 17 35394097 to 35394099 2 + TSS region transcription start site region 144366
H2-Q5 17 35394099 to 35395630 1531 + polymorphic pseudogene histocompatibility 2, Q region locus 5
Cpgi9098 17 35395004 to 35395164 160 CpG island CpG island 9098
Gm8750 17 35400799 to 35403727 2928 + pseudogene predicted pseudogene 8750
Gm32252 17 35420315 to 35421911 1596 + lncRNA gene predicted gene, 32252
Cpgi9099 17 35424760 to 35425938 1178 CpG island CpG island 9099
Tssr144367 17 35424842 to 35424856 14 + TSS region transcription start site region 144367
Tssr144368 17 35424870 to 35424885 15 + TSS region transcription start site region 144368
H2-Q6 17 35424877 to 35428361 3484 + protein coding gene histocompatibility 2, Q region locus 6
Tssr144369 17 35425314 to 35425350 36 + TSS region transcription start site region 144369
Tssr147837 17 35425350 to 35425380 30 - TSS region transcription start site region 147837
Tssr144370 17 35428103 to 35428115 12 + TSS region transcription start site region 144370
Cpgi9100 17 35438999 to 35439706 707 CpG island CpG island 9100
H2-Q7 17 35439155 to 35443773 4618 + protein coding gene histocompatibility 2, Q region locus 7
Tssr144371 17 35439192 to 35439195 3 + TSS region transcription start site region 144371
Cpgi9101 17 35440026 to 35440226 200 CpG island CpG island 9101
Gm8752 17 35445994 to 35448923 2929 + pseudogene predicted pseudogene 8752
Cpgi9102 17 35469776 to 35471072 1296 CpG island CpG island 9102
Tssr144372 17 35470083 to 35470095 12 + TSS region transcription start site region 144372
H2-Q10 17 35470089 to 35474563 4474 + protein coding gene histocompatibility 2, Q region locus 10
Tssr144373 17 35470435 to 35470441 6 + TSS region transcription start site region 144373
Tssr144374 17 35470759 to 35470762 3 + TSS region transcription start site region 144374
Tssr144375 17 35470863 to 35470881 18 + TSS region transcription start site region 144375
Tssr144376 17 35470974 to 35471019 45 + TSS region transcription start site region 144376
Tssr144377 17 35471644 to 35471683 39 + TSS region transcription start site region 144377
Tssr144378 17 35473482 to 35473490 8 + TSS region transcription start site region 144378