Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35265405-35380099

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
H2-D1 17 35263094 to 35267497 4403 + protein coding gene histocompatibility 2, D region locus 1
Tssr144348 17 35265790 to 35265812 22 + TSS region transcription start site region 144348
Tssr144349 17 35266179 to 35266252 73 + TSS region transcription start site region 144349
Tssr147834 17 35267000 to 35267088 88 - TSS region transcription start site region 147834
Tssr144350 17 35267004 to 35267042 38 + TSS region transcription start site region 144350
Tssr144351 17 35267093 to 35267108 15 + TSS region transcription start site region 144351
Tssr144352 17 35267139 to 35267193 54 + TSS region transcription start site region 144352
Tssr147835 17 35267184 to 35267221 37 - TSS region transcription start site region 147835
Tssr144353 17 35267251 to 35267279 28 + TSS region transcription start site region 144353
Tssr5104 17 35267486 to 35267497 11 - TSS region transcription start site region 5104
Gm18733 17 35278154 to 35279231 1077 - pseudogene predicted gene, 18733
Gm18734 17 35304206 to 35306317 2111 - pseudogene predicted gene, 18734
H2-Q1 17 35320405 to 35325099 4694 + protein coding gene histocompatibility 2, Q region locus 1
Cpgi9093 17 35320460 to 35321525 1065 CpG island CpG island 9093
Tssr144354 17 35320529 to 35320557 28 + TSS region transcription start site region 144354
D17Rua9 17 35322046 to 35322259 213 DNA segment DNA segment, Chr 17, Rutgers University 9
Tssr144355 17 35335849 to 35335890 41 + TSS region transcription start site region 144355
Gm8741 17 35335909 to 35336292 383 + pseudogene predicted gene 8741
Cpgi9094 17 35342232 to 35343356 1124 CpG island CpG island 9094
H2-Q2 17 35342242 to 35346762 4520 + protein coding gene histocompatibility 2, Q region locus 2
Tssr144356 17 35342299 to 35342330 31 + TSS region transcription start site region 144356
Tssr144357 17 35343149 to 35343161 12 + TSS region transcription start site region 144357
Tssr144358 17 35343172 to 35343190 18 + TSS region transcription start site region 144358
Tssr144359 17 35345662 to 35345668 6 + TSS region transcription start site region 144359
Cpgi9095 17 35358866 to 35359823 957 CpG island CpG island 9095
Tssr144360 17 35358969 to 35358989 20 + TSS region transcription start site region 144360
H2-Q3 17 35358989 to 35359972 983 + pseudogene histocompatibility 2, Q region locus 3
Gm11131 17 35377021 to 35380292 3271 - antisense lncRNA gene predicted gene 11131
Cpgi9096 17 35379490 to 35380606 1116 CpG island CpG island 9096
Tssr144361 17 35379586 to 35379600 14 + TSS region transcription start site region 144361
Tssr144362 17 35379608 to 35379637 29 + TSS region transcription start site region 144362
H2-Q4 17 35379617 to 35384674 5057 + protein coding gene histocompatibility 2, Q region locus 4