Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35196327-35816339

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302 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9086 17 35195311 to 35196467 1156 CpG island CpG island 9086
Lbw1 17 35199381 to 35202007 2626 QTL lupus NZB x NZW 1
Tnf 17 35199381 to 35202007 2626 - protein coding gene tumor necrosis factor
Tssr147794 17 35199391 to 35199405 14 - TSS region transcription start site region 147794
Tssr147795 17 35199411 to 35199433 22 - TSS region transcription start site region 147795
Tssr147796 17 35199672 to 35199675 3 - TSS region transcription start site region 147796
Tssr147797 17 35199755 to 35199766 11 - TSS region transcription start site region 147797
Tssr144280 17 35199946 to 35199955 9 + TSS region transcription start site region 144280
Tssr147798 17 35200021 to 35200033 12 - TSS region transcription start site region 147798
Tssr147799 17 35200103 to 35200115 12 - TSS region transcription start site region 147799
Tssr147800 17 35200124 to 35200138 14 - TSS region transcription start site region 147800
Tssr144281 17 35200283 to 35200304 21 + TSS region transcription start site region 144281
Tssr147801 17 35200287 to 35200299 12 - TSS region transcription start site region 147801
Tssr147802 17 35200313 to 35200333 20 - TSS region transcription start site region 147802
Tssr144282 17 35200323 to 35200329 6 + TSS region transcription start site region 144282
Tssr144283 17 35200339 to 35200352 13 + TSS region transcription start site region 144283
Tssr147803 17 35200339 to 35200358 19 - TSS region transcription start site region 147803
Tssr147804 17 35200365 to 35200378 13 - TSS region transcription start site region 147804
Tssr144284 17 35200371 to 35200392 21 + TSS region transcription start site region 144284
Tssr147805 17 35200388 to 35200399 11 - TSS region transcription start site region 147805
Tssr144285 17 35200394 to 35200403 9 + TSS region transcription start site region 144285
Tssr147806 17 35200413 to 35200422 9 - TSS region transcription start site region 147806
Tssr144286 17 35200418 to 35200430 12 + TSS region transcription start site region 144286
Tssr144287 17 35200432 to 35200479 47 + TSS region transcription start site region 144287
Tssr147807 17 35200443 to 35200455 12 - TSS region transcription start site region 147807
Tssr147808 17 35200471 to 35200486 15 - TSS region transcription start site region 147808
Tssr147809 17 35200521 to 35200528 7 - TSS region transcription start site region 147809
Tssr144288 17 35200526 to 35200543 17 + TSS region transcription start site region 144288
Tssr147810 17 35200538 to 35200544 6 - TSS region transcription start site region 147810
Tssr147811 17 35200564 to 35200573 9 - TSS region transcription start site region 147811
Tssr144289 17 35200719 to 35200727 8 + TSS region transcription start site region 144289
Tssr144290 17 35200735 to 35200746 11 + TSS region transcription start site region 144290
Tssr144291 17 35200751 to 35200758 7 + TSS region transcription start site region 144291
Tssr144292 17 35200851 to 35200872 21 + TSS region transcription start site region 144292
Tssr147812 17 35200923 to 35200935 12 - TSS region transcription start site region 147812
Tssr147813 17 35201135 to 35201147 12 - TSS region transcription start site region 147813
Tssr147814 17 35201996 to 35202014 18 - TSS region transcription start site region 147814
Tssr144293 17 35202681 to 35202696 15 + TSS region transcription start site region 144293
Lta 17 35203165 to 35205351 2186 - protein coding gene lymphotoxin A
Pas2 17 35203165 to 35205351 2186 QTL pulmonary adenoma susceptibility 2
Mir6974 17 35204475 to 35204557 82 - miRNA gene microRNA 6974
Tssr147815 17 35204646 to 35204654 8 - TSS region transcription start site region 147815
Tssr147816 17 35204665 to 35204685 20 - TSS region transcription start site region 147816
D17Nds3 17 35204859 to 35204998 139 DNA segment DNA segment, Chr 17, Nuffield Department of Surgery 3
Tssr147817 17 35205165 to 35205223 58 - TSS region transcription start site region 147817
Tssr147818 17 35205305 to 35205317 12 - TSS region transcription start site region 147818
Tssr147819 17 35205483 to 35205510 27 - TSS region transcription start site region 147819
Tssr144294 17 35210452 to 35210463 11 + TSS region transcription start site region 144294
Tssr144295 17 35210468 to 35210509 41 + TSS region transcription start site region 144295
Tssr147820 17 35219586 to 35219593 7 - TSS region transcription start site region 147820
Tssr147821 17 35219596 to 35219611 15 - TSS region transcription start site region 147821
Dp(17Nfkbil1-Olfr91)1Cogr 17 35220175 to 37098278 1878103 chromosomal duplication duplication, Chr 17, Cornelius Gross 1
Nfkbil1 17 35220175 to 35235792 15617 - protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1
Tssr144296 17 35220284 to 35220291 7 + TSS region transcription start site region 144296
Tssr144297 17 35220296 to 35220317 21 + TSS region transcription start site region 144297
Cpgi9087 17 35220485 to 35220970 485 CpG island CpG island 9087
Gm16181 17 35220834 to 35224134 3300 + protein coding gene predicted gene 16181
Tssr144298 17 35233005 to 35233014 9 + TSS region transcription start site region 144298
Cpgi9088 17 35234851 to 35235379 528 CpG island CpG island 9088
Tssr147822 17 35234996 to 35235034 38 - TSS region transcription start site region 147822
Tssr144299 17 35235087 to 35235111 24 + TSS region transcription start site region 144299
Atp6v1g2 17 35235166 to 35238767 3601 + protein coding gene ATPase, H+ transporting, lysosomal V1 subunit G2
Tssr147823 17 35235215 to 35235260 45 - TSS region transcription start site region 147823
Tssr147824 17 35235693 to 35235709 16 - TSS region transcription start site region 147824
Cpgi9089 17 35235729 to 35236067 338 CpG island CpG island 9089
Tssr147825 17 35235735 to 35235742 7 - TSS region transcription start site region 147825
Tssr147826 17 35235755 to 35235817 62 - TSS region transcription start site region 147826
Tssr144300 17 35235857 to 35235890 33 + TSS region transcription start site region 144300
Tssr144301 17 35235897 to 35235913 16 + TSS region transcription start site region 144301
Cpgi9090 17 35236336 to 35236845 509 CpG island CpG island 9090
Tssr147827 17 35236494 to 35236531 37 - TSS region transcription start site region 147827
Tssr144302 17 35236556 to 35236607 51 + TSS region transcription start site region 144302
Tssr144303 17 35236608 to 35236617 9 + TSS region transcription start site region 144303
Tssr144304 17 35236650 to 35236668 18 + TSS region transcription start site region 144304
Tssr144305 17 35236670 to 35236679 9 + TSS region transcription start site region 144305
Tssr5102 17 35236684 to 35236693 9 + TSS region transcription start site region 5102
Tssr144306 17 35236695 to 35236759 64 + TSS region transcription start site region 144306
Tssr144307 17 35237673 to 35237693 20 + TSS region transcription start site region 144307
Tssr144308 17 35237759 to 35237777 18 + TSS region transcription start site region 144308
Tssr144309 17 35237810 to 35237822 12 + TSS region transcription start site region 144309
Tssr144310 17 35237895 to 35237918 23 + TSS region transcription start site region 144310
Tssr144311 17 35237923 to 35237934 11 + TSS region transcription start site region 144311
Tssr144312 17 35237965 to 35237981 16 + TSS region transcription start site region 144312
Tssr144313 17 35237985 to 35238010 25 + TSS region transcription start site region 144313
Tssr144314 17 35238167 to 35238181 14 + TSS region transcription start site region 144314
Tssr144315 17 35238342 to 35238371 29 + TSS region transcription start site region 144315
Tssr144316 17 35238378 to 35238404 26 + TSS region transcription start site region 144316
Cpgi9091 17 35241342 to 35243428 2086 CpG island CpG island 9091
Ddx39b 17 35241746 to 35253707 11961 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Tssr144317 17 35241766 to 35241774 8 + TSS region transcription start site region 144317
Tssr144318 17 35241785 to 35241837 52 + TSS region transcription start site region 144318
Tssr144319 17 35241838 to 35241854 16 + TSS region transcription start site region 144319
Tssr144320 17 35242168 to 35242198 30 + TSS region transcription start site region 144320
Tssr144321 17 35242343 to 35242355 12 + TSS region transcription start site region 144321
Gm22589 17 35242678 to 35242754 76 + snoRNA gene predicted gene, 22589
Tssr147828 17 35242702 to 35242708 6 - TSS region transcription start site region 147828
Tssr144322 17 35242868 to 35242880 12 + TSS region transcription start site region 144322
Tssr144323 17 35242995 to 35243017 22 + TSS region transcription start site region 144323
Tssr144324 17 35243058 to 35243069 11 + TSS region transcription start site region 144324
Tssr144325 17 35243093 to 35243150 57 + TSS region transcription start site region 144325
Tssr144326 17 35243152 to 35243176 24 + TSS region transcription start site region 144326
Tssr144327 17 35243205 to 35243227 22 + TSS region transcription start site region 144327
Mir6975 17 35244075 to 35244135 60 + miRNA gene microRNA 6975
Tssr144328 17 35247003 to 35247033 30 + TSS region transcription start site region 144328
Tssr144329 17 35247174 to 35247177 3 + TSS region transcription start site region 144329
Gm25128 17 35247175 to 35247250 75 + snoRNA gene predicted gene, 25128
Tssr144330 17 35248966 to 35248991 25 + TSS region transcription start site region 144330
Tssr144331 17 35249081 to 35249129 48 + TSS region transcription start site region 144331
Tssr144332 17 35251214 to 35251237 23 + TSS region transcription start site region 144332
Mir8094 17 35251289 to 35251405 116 + miRNA gene microRNA 8094
Tssr5103 17 35253532 to 35253593 61 + TSS region transcription start site region 5103
Tssr147829 17 35258089 to 35258103 14 - TSS region transcription start site region 147829
Tssr147830 17 35258268 to 35258291 23 - TSS region transcription start site region 147830
Tssr144333 17 35259346 to 35259359 13 + TSS region transcription start site region 144333
5430410E06Rik 17 35262268 to 35263603 1335 unclassified gene RIKEN cDNA 5430410E06 gene
Tssr144334 17 35262726 to 35262776 50 + TSS region transcription start site region 144334
Cpgi9092 17 35262762 to 35264256 1494 CpG island CpG island 9092
Tssr144335 17 35262802 to 35262823 21 + TSS region transcription start site region 144335
Tssr147831 17 35262845 to 35262854 9 - TSS region transcription start site region 147831
Tssr144336 17 35263063 to 35263074 11 + TSS region transcription start site region 144336
Tssr144337 17 35263087 to 35263100 13 + TSS region transcription start site region 144337
H2-D1 17 35263094 to 35267497 4403 + protein coding gene histocompatibility 2, D region locus 1
Tssr144338 17 35263291 to 35263310 19 + TSS region transcription start site region 144338
Tssr144339 17 35263425 to 35263457 32 + TSS region transcription start site region 144339
Tssr147832 17 35263591 to 35263618 27 - TSS region transcription start site region 147832
Tssr144340 17 35263759 to 35263768 9 + TSS region transcription start site region 144340
Tssr144341 17 35263864 to 35263885 21 + TSS region transcription start site region 144341
Tssr144342 17 35263961 to 35263990 29 + TSS region transcription start site region 144342
Tssr144343 17 35264046 to 35264058 12 + TSS region transcription start site region 144343
Tssr147833 17 35264068 to 35264104 36 - TSS region transcription start site region 147833
Tssr144344 17 35264397 to 35264418 21 + TSS region transcription start site region 144344
Tssr144345 17 35264776 to 35264787 11 + TSS region transcription start site region 144345
Tssr144346 17 35264836 to 35264850 14 + TSS region transcription start site region 144346
Tssr144347 17 35264891 to 35264895 4 + TSS region transcription start site region 144347
Tssr144348 17 35265790 to 35265812 22 + TSS region transcription start site region 144348
Tssr144349 17 35266179 to 35266252 73 + TSS region transcription start site region 144349
Tssr147834 17 35267000 to 35267088 88 - TSS region transcription start site region 147834
Tssr144350 17 35267004 to 35267042 38 + TSS region transcription start site region 144350
Tssr144351 17 35267093 to 35267108 15 + TSS region transcription start site region 144351
Tssr144352 17 35267139 to 35267193 54 + TSS region transcription start site region 144352
Tssr147835 17 35267184 to 35267221 37 - TSS region transcription start site region 147835
Tssr144353 17 35267251 to 35267279 28 + TSS region transcription start site region 144353
Tssr5104 17 35267486 to 35267497 11 - TSS region transcription start site region 5104
Gm18733 17 35278154 to 35279231 1077 - pseudogene predicted gene, 18733
Gm18734 17 35304206 to 35306317 2111 - pseudogene predicted gene, 18734
H2-Q1 17 35320405 to 35325099 4694 + protein coding gene histocompatibility 2, Q region locus 1
Cpgi9093 17 35320460 to 35321525 1065 CpG island CpG island 9093
Tssr144354 17 35320529 to 35320557 28 + TSS region transcription start site region 144354
D17Rua9 17 35322046 to 35322259 213 DNA segment DNA segment, Chr 17, Rutgers University 9
Tssr144355 17 35335849 to 35335890 41 + TSS region transcription start site region 144355
Gm8741 17 35335909 to 35336292 383 + pseudogene predicted gene 8741
Cpgi9094 17 35342232 to 35343356 1124 CpG island CpG island 9094
H2-Q2 17 35342242 to 35346762 4520 + protein coding gene histocompatibility 2, Q region locus 2
Tssr144356 17 35342299 to 35342330 31 + TSS region transcription start site region 144356
Tssr144357 17 35343149 to 35343161 12 + TSS region transcription start site region 144357
Tssr144358 17 35343172 to 35343190 18 + TSS region transcription start site region 144358
Tssr144359 17 35345662 to 35345668 6 + TSS region transcription start site region 144359
Cpgi9095 17 35358866 to 35359823 957 CpG island CpG island 9095
Tssr144360 17 35358969 to 35358989 20 + TSS region transcription start site region 144360
H2-Q3 17 35358989 to 35359972 983 + pseudogene histocompatibility 2, Q region locus 3
Gm11131 17 35377021 to 35380292 3271 - antisense lncRNA gene predicted gene 11131
Cpgi9096 17 35379490 to 35380606 1116 CpG island CpG island 9096
Tssr144361 17 35379586 to 35379600 14 + TSS region transcription start site region 144361
Tssr144362 17 35379608 to 35379637 29 + TSS region transcription start site region 144362
H2-Q4 17 35379617 to 35384674 5057 + protein coding gene histocompatibility 2, Q region locus 4
Tssr147836 17 35380256 to 35380277 21 - TSS region transcription start site region 147836
Tssr144363 17 35380403 to 35380435 32 + TSS region transcription start site region 144363
Tssr144364 17 35381543 to 35381548 5 + TSS region transcription start site region 144364
Tssr144365 17 35384195 to 35384226 31 + TSS region transcription start site region 144365
Gm41576 17 35389547 to 35390085 538 + lncRNA gene predicted gene, 41576
Cpgi9097 17 35394094 to 35394609 515 CpG island CpG island 9097
Tssr144366 17 35394097 to 35394099 2 + TSS region transcription start site region 144366
H2-Q5 17 35394099 to 35395630 1531 + polymorphic pseudogene histocompatibility 2, Q region locus 5
Cpgi9098 17 35395004 to 35395164 160 CpG island CpG island 9098
Gm8750 17 35400799 to 35403727 2928 + pseudogene predicted pseudogene 8750
Gm32252 17 35420315 to 35421911 1596 + lncRNA gene predicted gene, 32252
Cpgi9099 17 35424760 to 35425938 1178 CpG island CpG island 9099
Tssr144367 17 35424842 to 35424856 14 + TSS region transcription start site region 144367
Tssr144368 17 35424870 to 35424885 15 + TSS region transcription start site region 144368
H2-Q6 17 35424877 to 35428361 3484 + protein coding gene histocompatibility 2, Q region locus 6
Tssr144369 17 35425314 to 35425350 36 + TSS region transcription start site region 144369
Tssr147837 17 35425350 to 35425380 30 - TSS region transcription start site region 147837
Tssr144370 17 35428103 to 35428115 12 + TSS region transcription start site region 144370
Cpgi9100 17 35438999 to 35439706 707 CpG island CpG island 9100
H2-Q7 17 35439155 to 35443773 4618 + protein coding gene histocompatibility 2, Q region locus 7
Tssr144371 17 35439192 to 35439195 3 + TSS region transcription start site region 144371
Cpgi9101 17 35440026 to 35440226 200 CpG island CpG island 9101
Gm8752 17 35445994 to 35448923 2929 + pseudogene predicted pseudogene 8752
Cpgi9102 17 35469776 to 35471072 1296 CpG island CpG island 9102
Tssr144372 17 35470083 to 35470095 12 + TSS region transcription start site region 144372
H2-Q10 17 35470089 to 35474563 4474 + protein coding gene histocompatibility 2, Q region locus 10
Tssr144373 17 35470435 to 35470441 6 + TSS region transcription start site region 144373
Tssr144374 17 35470759 to 35470762 3 + TSS region transcription start site region 144374
Tssr144375 17 35470863 to 35470881 18 + TSS region transcription start site region 144375
Tssr144376 17 35470974 to 35471019 45 + TSS region transcription start site region 144376
Tssr144377 17 35471644 to 35471683 39 + TSS region transcription start site region 144377
Tssr144378 17 35473482 to 35473490 8 + TSS region transcription start site region 144378
Gm32362 17 35500641 to 35505737 5096 - lncRNA gene predicted gene, 32362
Tssr147838 17 35503924 to 35503936 12 - TSS region transcription start site region 147838
Tssr147839 17 35505912 to 35505934 22 - TSS region transcription start site region 147839