Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35190727-36170744

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584 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dps3 17 33600747 to 35939288 2338541 QTL delta power in slow-wave sleep 3
Cpgi9085 17 35193966 to 35194227 261 CpG island CpG island 9085
Tssr144265 17 35194142 to 35194155 13 + TSS region transcription start site region 144265
Tssr144266 17 35194324 to 35194339 15 + TSS region transcription start site region 144266
Tssr144267 17 35194405 to 35194421 16 + TSS region transcription start site region 144267
Tssr144268 17 35194502 to 35194521 19 + TSS region transcription start site region 144268
Ltb 17 35194507 to 35196305 1798 + protein coding gene lymphotoxin B
Tssr144269 17 35194597 to 35194602 5 + TSS region transcription start site region 144269
Tssr144270 17 35194891 to 35194909 18 + TSS region transcription start site region 144270
Tssr144271 17 35194910 to 35194923 13 + TSS region transcription start site region 144271
Mir6973a 17 35194972 to 35195049 77 + miRNA gene microRNA 6973a
Tssr144272 17 35195020 to 35195039 19 + TSS region transcription start site region 144272
Tssr144273 17 35195040 to 35195050 10 + TSS region transcription start site region 144273
Tssr144274 17 35195052 to 35195068 16 + TSS region transcription start site region 144274
Tssr144275 17 35195078 to 35195089 11 + TSS region transcription start site region 144275
Tssr144276 17 35195107 to 35195148 41 + TSS region transcription start site region 144276
Cpgi9086 17 35195311 to 35196467 1156 CpG island CpG island 9086
Tssr144277 17 35195532 to 35195545 13 + TSS region transcription start site region 144277
Tssr147792 17 35195716 to 35195726 10 - TSS region transcription start site region 147792
Tssr144278 17 35195865 to 35195897 32 + TSS region transcription start site region 144278
Tssr144279 17 35195971 to 35195978 7 + TSS region transcription start site region 144279
Tssr147793 17 35196173 to 35196200 27 - TSS region transcription start site region 147793
Lbw1 17 35199381 to 35202007 2626 QTL lupus NZB x NZW 1
Tnf 17 35199381 to 35202007 2626 - protein coding gene tumor necrosis factor
Tssr147794 17 35199391 to 35199405 14 - TSS region transcription start site region 147794
Tssr147795 17 35199411 to 35199433 22 - TSS region transcription start site region 147795
Tssr147796 17 35199672 to 35199675 3 - TSS region transcription start site region 147796
Tssr147797 17 35199755 to 35199766 11 - TSS region transcription start site region 147797
Tssr144280 17 35199946 to 35199955 9 + TSS region transcription start site region 144280
Tssr147798 17 35200021 to 35200033 12 - TSS region transcription start site region 147798
Tssr147799 17 35200103 to 35200115 12 - TSS region transcription start site region 147799
Tssr147800 17 35200124 to 35200138 14 - TSS region transcription start site region 147800
Tssr144281 17 35200283 to 35200304 21 + TSS region transcription start site region 144281
Tssr147801 17 35200287 to 35200299 12 - TSS region transcription start site region 147801
Tssr147802 17 35200313 to 35200333 20 - TSS region transcription start site region 147802
Tssr144282 17 35200323 to 35200329 6 + TSS region transcription start site region 144282
Tssr144283 17 35200339 to 35200352 13 + TSS region transcription start site region 144283
Tssr147803 17 35200339 to 35200358 19 - TSS region transcription start site region 147803
Tssr147804 17 35200365 to 35200378 13 - TSS region transcription start site region 147804
Tssr144284 17 35200371 to 35200392 21 + TSS region transcription start site region 144284
Tssr147805 17 35200388 to 35200399 11 - TSS region transcription start site region 147805
Tssr144285 17 35200394 to 35200403 9 + TSS region transcription start site region 144285
Tssr147806 17 35200413 to 35200422 9 - TSS region transcription start site region 147806
Tssr144286 17 35200418 to 35200430 12 + TSS region transcription start site region 144286
Tssr144287 17 35200432 to 35200479 47 + TSS region transcription start site region 144287
Tssr147807 17 35200443 to 35200455 12 - TSS region transcription start site region 147807
Tssr147808 17 35200471 to 35200486 15 - TSS region transcription start site region 147808
Tssr147809 17 35200521 to 35200528 7 - TSS region transcription start site region 147809
Tssr144288 17 35200526 to 35200543 17 + TSS region transcription start site region 144288
Tssr147810 17 35200538 to 35200544 6 - TSS region transcription start site region 147810
Tssr147811 17 35200564 to 35200573 9 - TSS region transcription start site region 147811
Tssr144289 17 35200719 to 35200727 8 + TSS region transcription start site region 144289
Tssr144290 17 35200735 to 35200746 11 + TSS region transcription start site region 144290
Tssr144291 17 35200751 to 35200758 7 + TSS region transcription start site region 144291
Tssr144292 17 35200851 to 35200872 21 + TSS region transcription start site region 144292
Tssr147812 17 35200923 to 35200935 12 - TSS region transcription start site region 147812
Tssr147813 17 35201135 to 35201147 12 - TSS region transcription start site region 147813
Tssr147814 17 35201996 to 35202014 18 - TSS region transcription start site region 147814
Tssr144293 17 35202681 to 35202696 15 + TSS region transcription start site region 144293
Pas2 17 35203165 to 35205351 2186 QTL pulmonary adenoma susceptibility 2
Lta 17 35203165 to 35205351 2186 - protein coding gene lymphotoxin A
Mir6974 17 35204475 to 35204557 82 - miRNA gene microRNA 6974
Tssr147815 17 35204646 to 35204654 8 - TSS region transcription start site region 147815
Tssr147816 17 35204665 to 35204685 20 - TSS region transcription start site region 147816
D17Nds3 17 35204859 to 35204998 139 DNA segment DNA segment, Chr 17, Nuffield Department of Surgery 3
Tssr147817 17 35205165 to 35205223 58 - TSS region transcription start site region 147817
Tssr147818 17 35205305 to 35205317 12 - TSS region transcription start site region 147818
Tssr147819 17 35205483 to 35205510 27 - TSS region transcription start site region 147819
Tssr144294 17 35210452 to 35210463 11 + TSS region transcription start site region 144294
Tssr144295 17 35210468 to 35210509 41 + TSS region transcription start site region 144295
Tssr147820 17 35219586 to 35219593 7 - TSS region transcription start site region 147820
Tssr147821 17 35219596 to 35219611 15 - TSS region transcription start site region 147821
Dp(17Nfkbil1-Olfr91)1Cogr 17 35220175 to 37098278 1878103 chromosomal duplication duplication, Chr 17, Cornelius Gross 1
Nfkbil1 17 35220175 to 35235792 15617 - protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1
Tssr144296 17 35220284 to 35220291 7 + TSS region transcription start site region 144296
Tssr144297 17 35220296 to 35220317 21 + TSS region transcription start site region 144297
Cpgi9087 17 35220485 to 35220970 485 CpG island CpG island 9087
Gm16181 17 35220834 to 35224134 3300 + protein coding gene predicted gene 16181
Tssr144298 17 35233005 to 35233014 9 + TSS region transcription start site region 144298
Cpgi9088 17 35234851 to 35235379 528 CpG island CpG island 9088
Tssr147822 17 35234996 to 35235034 38 - TSS region transcription start site region 147822
Tssr144299 17 35235087 to 35235111 24 + TSS region transcription start site region 144299
Atp6v1g2 17 35235166 to 35238767 3601 + protein coding gene ATPase, H+ transporting, lysosomal V1 subunit G2
Tssr147823 17 35235215 to 35235260 45 - TSS region transcription start site region 147823
Tssr147824 17 35235693 to 35235709 16 - TSS region transcription start site region 147824
Cpgi9089 17 35235729 to 35236067 338 CpG island CpG island 9089
Tssr147825 17 35235735 to 35235742 7 - TSS region transcription start site region 147825
Tssr147826 17 35235755 to 35235817 62 - TSS region transcription start site region 147826
Tssr144300 17 35235857 to 35235890 33 + TSS region transcription start site region 144300
Tssr144301 17 35235897 to 35235913 16 + TSS region transcription start site region 144301
Cpgi9090 17 35236336 to 35236845 509 CpG island CpG island 9090
Tssr147827 17 35236494 to 35236531 37 - TSS region transcription start site region 147827
Tssr144302 17 35236556 to 35236607 51 + TSS region transcription start site region 144302
Tssr144303 17 35236608 to 35236617 9 + TSS region transcription start site region 144303
Tssr144304 17 35236650 to 35236668 18 + TSS region transcription start site region 144304
Tssr144305 17 35236670 to 35236679 9 + TSS region transcription start site region 144305
Tssr5102 17 35236684 to 35236693 9 + TSS region transcription start site region 5102
Tssr144306 17 35236695 to 35236759 64 + TSS region transcription start site region 144306
Tssr144307 17 35237673 to 35237693 20 + TSS region transcription start site region 144307
Tssr144308 17 35237759 to 35237777 18 + TSS region transcription start site region 144308
Tssr144309 17 35237810 to 35237822 12 + TSS region transcription start site region 144309
Tssr144310 17 35237895 to 35237918 23 + TSS region transcription start site region 144310
Tssr144311 17 35237923 to 35237934 11 + TSS region transcription start site region 144311
Tssr144312 17 35237965 to 35237981 16 + TSS region transcription start site region 144312
Tssr144313 17 35237985 to 35238010 25 + TSS region transcription start site region 144313
Tssr144314 17 35238167 to 35238181 14 + TSS region transcription start site region 144314
Tssr144315 17 35238342 to 35238371 29 + TSS region transcription start site region 144315
Tssr144316 17 35238378 to 35238404 26 + TSS region transcription start site region 144316
Cpgi9091 17 35241342 to 35243428 2086 CpG island CpG island 9091
Ddx39b 17 35241746 to 35253707 11961 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Tssr144317 17 35241766 to 35241774 8 + TSS region transcription start site region 144317
Tssr144318 17 35241785 to 35241837 52 + TSS region transcription start site region 144318
Tssr144319 17 35241838 to 35241854 16 + TSS region transcription start site region 144319
Tssr144320 17 35242168 to 35242198 30 + TSS region transcription start site region 144320
Tssr144321 17 35242343 to 35242355 12 + TSS region transcription start site region 144321
Gm22589 17 35242678 to 35242754 76 + snoRNA gene predicted gene, 22589
Tssr147828 17 35242702 to 35242708 6 - TSS region transcription start site region 147828
Tssr144322 17 35242868 to 35242880 12 + TSS region transcription start site region 144322
Tssr144323 17 35242995 to 35243017 22 + TSS region transcription start site region 144323
Tssr144324 17 35243058 to 35243069 11 + TSS region transcription start site region 144324
Tssr144325 17 35243093 to 35243150 57 + TSS region transcription start site region 144325
Tssr144326 17 35243152 to 35243176 24 + TSS region transcription start site region 144326
Tssr144327 17 35243205 to 35243227 22 + TSS region transcription start site region 144327
Mir6975 17 35244075 to 35244135 60 + miRNA gene microRNA 6975
Tssr144328 17 35247003 to 35247033 30 + TSS region transcription start site region 144328
Tssr144329 17 35247174 to 35247177 3 + TSS region transcription start site region 144329
Gm25128 17 35247175 to 35247250 75 + snoRNA gene predicted gene, 25128
Tssr144330 17 35248966 to 35248991 25 + TSS region transcription start site region 144330
Tssr144331 17 35249081 to 35249129 48 + TSS region transcription start site region 144331
Tssr144332 17 35251214 to 35251237 23 + TSS region transcription start site region 144332
Mir8094 17 35251289 to 35251405 116 + miRNA gene microRNA 8094
Tssr5103 17 35253532 to 35253593 61 + TSS region transcription start site region 5103
Tssr147829 17 35258089 to 35258103 14 - TSS region transcription start site region 147829
Tssr147830 17 35258268 to 35258291 23 - TSS region transcription start site region 147830
Tssr144333 17 35259346 to 35259359 13 + TSS region transcription start site region 144333
5430410E06Rik 17 35262268 to 35263603 1335 unclassified gene RIKEN cDNA 5430410E06 gene
Tssr144334 17 35262726 to 35262776 50 + TSS region transcription start site region 144334
Cpgi9092 17 35262762 to 35264256 1494 CpG island CpG island 9092
Tssr144335 17 35262802 to 35262823 21 + TSS region transcription start site region 144335
Tssr147831 17 35262845 to 35262854 9 - TSS region transcription start site region 147831
Tssr144336 17 35263063 to 35263074 11 + TSS region transcription start site region 144336
Tssr144337 17 35263087 to 35263100 13 + TSS region transcription start site region 144337
H2-D1 17 35263094 to 35267497 4403 + protein coding gene histocompatibility 2, D region locus 1
Tssr144338 17 35263291 to 35263310 19 + TSS region transcription start site region 144338
Tssr144339 17 35263425 to 35263457 32 + TSS region transcription start site region 144339
Tssr147832 17 35263591 to 35263618 27 - TSS region transcription start site region 147832
Tssr144340 17 35263759 to 35263768 9 + TSS region transcription start site region 144340
Tssr144341 17 35263864 to 35263885 21 + TSS region transcription start site region 144341
Tssr144342 17 35263961 to 35263990 29 + TSS region transcription start site region 144342
Tssr144343 17 35264046 to 35264058 12 + TSS region transcription start site region 144343
Tssr147833 17 35264068 to 35264104 36 - TSS region transcription start site region 147833
Tssr144344 17 35264397 to 35264418 21 + TSS region transcription start site region 144344
Tssr144345 17 35264776 to 35264787 11 + TSS region transcription start site region 144345
Tssr144346 17 35264836 to 35264850 14 + TSS region transcription start site region 144346
Tssr144347 17 35264891 to 35264895 4 + TSS region transcription start site region 144347
Tssr144348 17 35265790 to 35265812 22 + TSS region transcription start site region 144348
Tssr144349 17 35266179 to 35266252 73 + TSS region transcription start site region 144349
Tssr147834 17 35267000 to 35267088 88 - TSS region transcription start site region 147834
Tssr144350 17 35267004 to 35267042 38 + TSS region transcription start site region 144350
Tssr144351 17 35267093 to 35267108 15 + TSS region transcription start site region 144351
Tssr144352 17 35267139 to 35267193 54 + TSS region transcription start site region 144352
Tssr147835 17 35267184 to 35267221 37 - TSS region transcription start site region 147835
Tssr144353 17 35267251 to 35267279 28 + TSS region transcription start site region 144353
Tssr5104 17 35267486 to 35267497 11 - TSS region transcription start site region 5104
Gm18733 17 35278154 to 35279231 1077 - pseudogene predicted gene, 18733
Gm18734 17 35304206 to 35306317 2111 - pseudogene predicted gene, 18734
H2-Q1 17 35320405 to 35325099 4694 + protein coding gene histocompatibility 2, Q region locus 1
Cpgi9093 17 35320460 to 35321525 1065 CpG island CpG island 9093
Tssr144354 17 35320529 to 35320557 28 + TSS region transcription start site region 144354
D17Rua9 17 35322046 to 35322259 213 DNA segment DNA segment, Chr 17, Rutgers University 9
Tssr144355 17 35335849 to 35335890 41 + TSS region transcription start site region 144355
Gm8741 17 35335909 to 35336292 383 + pseudogene predicted gene 8741
Cpgi9094 17 35342232 to 35343356 1124 CpG island CpG island 9094
H2-Q2 17 35342242 to 35346762 4520 + protein coding gene histocompatibility 2, Q region locus 2
Tssr144356 17 35342299 to 35342330 31 + TSS region transcription start site region 144356
Tssr144357 17 35343149 to 35343161 12 + TSS region transcription start site region 144357
Tssr144358 17 35343172 to 35343190 18 + TSS region transcription start site region 144358
Tssr144359 17 35345662 to 35345668 6 + TSS region transcription start site region 144359
Cpgi9095 17 35358866 to 35359823 957 CpG island CpG island 9095
Tssr144360 17 35358969 to 35358989 20 + TSS region transcription start site region 144360
H2-Q3 17 35358989 to 35359972 983 + pseudogene histocompatibility 2, Q region locus 3
Gm11131 17 35377021 to 35380292 3271 - antisense lncRNA gene predicted gene 11131
Cpgi9096 17 35379490 to 35380606 1116 CpG island CpG island 9096
Tssr144361 17 35379586 to 35379600 14 + TSS region transcription start site region 144361
Tssr144362 17 35379608 to 35379637 29 + TSS region transcription start site region 144362
H2-Q4 17 35379617 to 35384674 5057 + protein coding gene histocompatibility 2, Q region locus 4
Tssr147836 17 35380256 to 35380277 21 - TSS region transcription start site region 147836
Tssr144363 17 35380403 to 35380435 32 + TSS region transcription start site region 144363
Tssr144364 17 35381543 to 35381548 5 + TSS region transcription start site region 144364
Tssr144365 17 35384195 to 35384226 31 + TSS region transcription start site region 144365
Gm41576 17 35389547 to 35390085 538 + lncRNA gene predicted gene, 41576
Cpgi9097 17 35394094 to 35394609 515 CpG island CpG island 9097
Tssr144366 17 35394097 to 35394099 2 + TSS region transcription start site region 144366
H2-Q5 17 35394099 to 35395630 1531 + polymorphic pseudogene histocompatibility 2, Q region locus 5
Cpgi9098 17 35395004 to 35395164 160 CpG island CpG island 9098
Gm8750 17 35400799 to 35403727 2928 + pseudogene predicted pseudogene 8750
Gm32252 17 35420315 to 35421911 1596 + lncRNA gene predicted gene, 32252
Cpgi9099 17 35424760 to 35425938 1178 CpG island CpG island 9099
Tssr144367 17 35424842 to 35424856 14 + TSS region transcription start site region 144367
Tssr144368 17 35424870 to 35424885 15 + TSS region transcription start site region 144368