Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:35160716-35230726

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112 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prrc2a 17 35149076 to 35164897 15821 - protein coding gene proline-rich coiled-coil 2A
Tssr147771 17 35160795 to 35160835 40 - TSS region transcription start site region 147771
Tssr147772 17 35162313 to 35162337 24 - TSS region transcription start site region 147772
Gm23442 17 35162563 to 35162696 133 - snoRNA gene predicted gene, 23442
Tssr147773 17 35163004 to 35163040 36 - TSS region transcription start site region 147773
Cpgi9084 17 35164210 to 35165436 1226 CpG island CpG island 9084
Tssr147774 17 35164576 to 35164663 87 - TSS region transcription start site region 147774
Tssr147775 17 35164844 to 35164851 7 - TSS region transcription start site region 147775
Tssr147776 17 35164860 to 35164889 29 - TSS region transcription start site region 147776
Tssr147777 17 35164891 to 35164901 10 - TSS region transcription start site region 147777
Tssr147778 17 35165013 to 35165026 13 - TSS region transcription start site region 147778
Gm17705 17 35165119 to 35167186 2067 + lincRNA gene predicted gene, 17705
Tssr147779 17 35165128 to 35165137 9 - TSS region transcription start site region 147779
Tssr147780 17 35165140 to 35165153 13 - TSS region transcription start site region 147780
Tssr147781 17 35165154 to 35165160 6 - TSS region transcription start site region 147781
Tssr147782 17 35165378 to 35165402 24 - TSS region transcription start site region 147782
Tssr144258 17 35170987 to 35170997 10 + TSS region transcription start site region 144258
Aif1 17 35170991 to 35176068 5077 - protein coding gene allograft inflammatory factor 1
Tssr144259 17 35171534 to 35171548 14 + TSS region transcription start site region 144259
Tssr144260 17 35172125 to 35172161 36 + TSS region transcription start site region 144260
Tssr147783 17 35172577 to 35172599 22 - TSS region transcription start site region 147783
Tssr147784 17 35172608 to 35172638 30 - TSS region transcription start site region 147784
Tssr147785 17 35173412 to 35173430 18 - TSS region transcription start site region 147785
Tssr147786 17 35175995 to 35176038 43 - TSS region transcription start site region 147786
Tssr147787 17 35176048 to 35176055 7 - TSS region transcription start site region 147787
Tssr147788 17 35177453 to 35177456 3 - TSS region transcription start site region 147788
Ncr3-ps 17 35180535 to 35184662 4127 + pseudogene natural cytotoxicity triggering receptor 3, pseudogene
Lst1 17 35185095 to 35188439 3344 - protein coding gene leukocyte specific transcript 1
Tssr144261 17 35186862 to 35186912 50 + TSS region transcription start site region 144261
Tssr144262 17 35186934 to 35186974 40 + TSS region transcription start site region 144262
Tssr147789 17 35186965 to 35187006 41 - TSS region transcription start site region 147789
Tssr144263 17 35187956 to 35187964 8 + TSS region transcription start site region 144263
Tssr147790 17 35188427 to 35188446 19 - TSS region transcription start site region 147790
Tssr147791 17 35190234 to 35190258 24 - TSS region transcription start site region 147791
Tssr144264 17 35190356 to 35190377 21 + TSS region transcription start site region 144264
Cpgi9085 17 35193966 to 35194227 261 CpG island CpG island 9085
Tssr144265 17 35194142 to 35194155 13 + TSS region transcription start site region 144265
Tssr144266 17 35194324 to 35194339 15 + TSS region transcription start site region 144266
Tssr144267 17 35194405 to 35194421 16 + TSS region transcription start site region 144267
Tssr144268 17 35194502 to 35194521 19 + TSS region transcription start site region 144268
Ltb 17 35194507 to 35196305 1798 + protein coding gene lymphotoxin B
Tssr144269 17 35194597 to 35194602 5 + TSS region transcription start site region 144269
Tssr144270 17 35194891 to 35194909 18 + TSS region transcription start site region 144270
Tssr144271 17 35194910 to 35194923 13 + TSS region transcription start site region 144271
Mir6973a 17 35194972 to 35195049 77 + miRNA gene microRNA 6973a
Tssr144272 17 35195020 to 35195039 19 + TSS region transcription start site region 144272
Tssr144273 17 35195040 to 35195050 10 + TSS region transcription start site region 144273
Tssr144274 17 35195052 to 35195068 16 + TSS region transcription start site region 144274
Tssr144275 17 35195078 to 35195089 11 + TSS region transcription start site region 144275
Tssr144276 17 35195107 to 35195148 41 + TSS region transcription start site region 144276
Cpgi9086 17 35195311 to 35196467 1156 CpG island CpG island 9086
Tssr144277 17 35195532 to 35195545 13 + TSS region transcription start site region 144277
Tssr147792 17 35195716 to 35195726 10 - TSS region transcription start site region 147792
Tssr144278 17 35195865 to 35195897 32 + TSS region transcription start site region 144278
Tssr144279 17 35195971 to 35195978 7 + TSS region transcription start site region 144279
Tssr147793 17 35196173 to 35196200 27 - TSS region transcription start site region 147793
Tnf 17 35199381 to 35202007 2626 - protein coding gene tumor necrosis factor
Lbw1 17 35199381 to 35202007 2626 QTL lupus NZB x NZW 1
Tssr147794 17 35199391 to 35199405 14 - TSS region transcription start site region 147794
Tssr147795 17 35199411 to 35199433 22 - TSS region transcription start site region 147795
Tssr147796 17 35199672 to 35199675 3 - TSS region transcription start site region 147796
Tssr147797 17 35199755 to 35199766 11 - TSS region transcription start site region 147797
Tssr144280 17 35199946 to 35199955 9 + TSS region transcription start site region 144280
Tssr147798 17 35200021 to 35200033 12 - TSS region transcription start site region 147798
Tssr147799 17 35200103 to 35200115 12 - TSS region transcription start site region 147799
Tssr147800 17 35200124 to 35200138 14 - TSS region transcription start site region 147800
Tssr144281 17 35200283 to 35200304 21 + TSS region transcription start site region 144281
Tssr147801 17 35200287 to 35200299 12 - TSS region transcription start site region 147801
Tssr147802 17 35200313 to 35200333 20 - TSS region transcription start site region 147802
Tssr144282 17 35200323 to 35200329 6 + TSS region transcription start site region 144282
Tssr147803 17 35200339 to 35200358 19 - TSS region transcription start site region 147803
Tssr144283 17 35200339 to 35200352 13 + TSS region transcription start site region 144283
Tssr147804 17 35200365 to 35200378 13 - TSS region transcription start site region 147804
Tssr144284 17 35200371 to 35200392 21 + TSS region transcription start site region 144284
Tssr147805 17 35200388 to 35200399 11 - TSS region transcription start site region 147805
Tssr144285 17 35200394 to 35200403 9 + TSS region transcription start site region 144285
Tssr147806 17 35200413 to 35200422 9 - TSS region transcription start site region 147806
Tssr144286 17 35200418 to 35200430 12 + TSS region transcription start site region 144286
Tssr144287 17 35200432 to 35200479 47 + TSS region transcription start site region 144287
Tssr147807 17 35200443 to 35200455 12 - TSS region transcription start site region 147807
Tssr147808 17 35200471 to 35200486 15 - TSS region transcription start site region 147808
Tssr147809 17 35200521 to 35200528 7 - TSS region transcription start site region 147809
Tssr144288 17 35200526 to 35200543 17 + TSS region transcription start site region 144288
Tssr147810 17 35200538 to 35200544 6 - TSS region transcription start site region 147810
Tssr147811 17 35200564 to 35200573 9 - TSS region transcription start site region 147811
Tssr144289 17 35200719 to 35200727 8 + TSS region transcription start site region 144289
Tssr144290 17 35200735 to 35200746 11 + TSS region transcription start site region 144290
Tssr144291 17 35200751 to 35200758 7 + TSS region transcription start site region 144291
Tssr144292 17 35200851 to 35200872 21 + TSS region transcription start site region 144292
Tssr147812 17 35200923 to 35200935 12 - TSS region transcription start site region 147812
Tssr147813 17 35201135 to 35201147 12 - TSS region transcription start site region 147813
Tssr147814 17 35201996 to 35202014 18 - TSS region transcription start site region 147814
Tssr144293 17 35202681 to 35202696 15 + TSS region transcription start site region 144293
Lta 17 35203165 to 35205351 2186 - protein coding gene lymphotoxin A
Pas2 17 35203165 to 35205351 2186 QTL pulmonary adenoma susceptibility 2
Mir6974 17 35204475 to 35204557 82 - miRNA gene microRNA 6974
Tssr147815 17 35204646 to 35204654 8 - TSS region transcription start site region 147815
Tssr147816 17 35204665 to 35204685 20 - TSS region transcription start site region 147816
D17Nds3 17 35204859 to 35204998 139 DNA segment DNA segment, Chr 17, Nuffield Department of Surgery 3
Tssr147817 17 35205165 to 35205223 58 - TSS region transcription start site region 147817
Tssr147818 17 35205305 to 35205317 12 - TSS region transcription start site region 147818
Tssr147819 17 35205483 to 35205510 27 - TSS region transcription start site region 147819
Tssr144294 17 35210452 to 35210463 11 + TSS region transcription start site region 144294
Tssr144295 17 35210468 to 35210509 41 + TSS region transcription start site region 144295
Tssr147820 17 35219586 to 35219593 7 - TSS region transcription start site region 147820
Tssr147821 17 35219596 to 35219611 15 - TSS region transcription start site region 147821
Dp(17Nfkbil1-Olfr91)1Cogr 17 35220175 to 37098278 1878103 chromosomal duplication duplication, Chr 17, Cornelius Gross 1
Nfkbil1 17 35220175 to 35235792 15617 - protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1
Tssr144296 17 35220284 to 35220291 7 + TSS region transcription start site region 144296
Tssr144297 17 35220296 to 35220317 21 + TSS region transcription start site region 144297
Cpgi9087 17 35220485 to 35220970 485 CpG island CpG island 9087
Gm16181 17 35220834 to 35224134 3300 + protein coding gene predicted gene 16181